CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88547	Canola	cytosol	89.43	98.58
CDX67989	Canola	cytosol	86.86	96.84
CDX79326	Canola	cytosol	87.63	96.32
Bra008421.1-P	Field mustard	cytosol	90.46	87.53
CDY70232	Canola	cytosol	89.95	87.03
CDX87375	Canola	cytosol	89.18	86.28
AT1G79550.2	Thale cress	cytosol	88.66	85.79
PGSC0003DMT400056871	Potato	cytosol	80.15	77.56
Solyc07g066600.2.1	Tomato	nucleus, plastid	79.64	77.06
KRH43698	Soybean	endoplasmic reticulum, nucleus	79.64	77.06
VIT_19s0085g00370.t01	Wine grape	cytosol	78.09	75.56
CDX79325	Canola	cytosol	59.28	68.86
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	24.23	67.63
CDY00798	Canola	plastid	75.26	60.58
CDX73803	Canola	plastid	75.52	60.54
CDY43401	Canola	plastid	74.74	60.42
CDY24247	Canola	plastid	74.48	60.08
CDY52872	Canola	cytosol	74.48	36.26

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	GO:A0A078IIE1	UniProt:A0A078IIE1
EnsemblPlants:CDY49746	ProteinID:CDY49746	ProteinID:CDY49746.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00093745001	InterPro:IPR015824	HAMAP:MF_00145
PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	MetaCyc:PWY-1042
MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_N
InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EE79A1	SEG:seg	:

Description

BnaA02g19260DPhosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078IIE1]

Coordinates

chrLK032856:+:75049..80995

Molecular Weight (calculated)

40607.3 Da

IEP (calculated)

5.519

GRAVY (calculated)

0.160

Length

388 amino acids

Sequence
(BLAST)

001: MREREIVCIT STTSSLSKLG SSLFTSTHCF LFCSSTMATK RSVGTLKEAD LKGKSVFVRV DLNVPLDDNS NITDDTRIRA AVPTIKYLMG NGSRVVLCSH
101: LGRPKGVTPK FSLKPLVPRL SELLGVEVVM ANDSIGEEVQ KLVAGLPEGG NDPEFAKKLA ALADKELDYL VGAVANPKKP FAAIVGGSKV STKIGVIESL
201: LSTVDILLLG GGMIFTFYKA QGHSVGSSLV EEDKLDLAKS LMEKAKAKGV SLLLPTDVVI ADKFAPDANS KIVPATAIPD GWMGLDVGPD SIKTFSEALD
301: TTQTIIWNGP MGVFEFEKFA AGTEAVAKQL AELSGKGVTT IIGGGDSVAA VEKVGLADKM SHISTGGGAS LELLEGKPLP GVLALDDA

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.