CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67989	Canola	cytosol	95.75	97.13
CDX88547	Canola	cytosol	96.03	96.31
CDY49746	Canola	plastid	96.32	87.63
CDX87375	Canola	cytosol	95.75	84.29
CDY70232	Canola	cytosol	95.75	84.29
AT1G79550.2	Thale cress	cytosol	95.18	83.79
PGSC0003DMT400056871	Potato	cytosol	88.1	77.56
Solyc07g066600.2.1	Tomato	nucleus, plastid	87.25	76.81
KRH43698	Soybean	endoplasmic reticulum, nucleus	86.12	75.81
VIT_19s0085g00370.t01	Wine grape	cytosol	84.99	74.81
CDX79325	Canola	cytosol	65.72	69.46
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	26.91	68.35
CDY00798	Canola	plastid	81.3	59.54
CDX73803	Canola	plastid	81.3	59.3
CDY43401	Canola	plastid	80.45	59.17
CDY24247	Canola	plastid	80.17	58.84
CDY52872	Canola	cytosol	80.17	35.51

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	GO:A0A078CQ51	EnsemblPlants:CDX79326
ProteinID:CDX79326	ProteinID:CDX79326.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00132004001	InterPro:IPR015824
HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11
MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EE097C	SEG:seg

Description

BnaC06g19770D

Coordinates

chrLK031817:-:1369349..1371800

Molecular Weight (calculated)

36966.9 Da

IEP (calculated)

4.898

GRAVY (calculated)

0.140

Length

353 amino acids

Sequence
(BLAST)

001: MATKRNVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKFSLKPL VPRLSELLGI EVVMANDSIG
101: EEVQKLVAAL PEGGNDPEFA KKLAALADLY ELDYLVGAVA NPKKPFAAIV GGSKVSTKIG VIESLLSTVD ILLLGGGMIY TFYKAQGHAV GSSLLEEDKL
201: DLARSLMEKA QDKGVSLLLP TDVVIADKFA PDANSKIVPA TAIPDGWMGL DIGPDSIKTF SEALDTTKTI IWNGPMGVFE FEKFAAGTEA VAKQLAELSG
301: KGVTTIIGGG DSVAAVEKVG LADKMSHIST GGGASLELLE GKPLPGVLAL DDA

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.