CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73803	Canola	plastid	95.85	95.45
AT3G12780.1	Thale cress	plastid	95.02	95.22
CDY24247	Canola	plastid	93.15	93.35
CDY43401	Canola	plastid	92.74	93.12
HORVU1Hr1G067300.1	Barley	plastid	75.1	88.73
Zm00001d010672_P001	Maize	cytosol	32.99	87.85
CDY70232	Canola	cytosol	69.71	83.79
CDX87375	Canola	cytosol	69.5	83.54
CDX88547	Canola	cytosol	60.37	82.67
CDX67989	Canola	cytosol	59.54	82.47
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	81.33	82.01
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	81.33	81.33
CDX79326	Canola	cytosol	59.54	81.3
KRH43699	Soybean	endoplasmic reticulum, nucleus	81.54	81.03
GSMUA_Achr4P33150_001	Banana	plasma membrane	80.08	80.58
Solyc07g066610.2.1	Tomato	plastid	80.5	80.5
KRH13755	Soybean	endoplasmic reticulum, nucleus	79.88	79.71
GSMUA_Achr6P00200_001	Banana	plastid	79.25	79.58
EES19743	Sorghum	plastid	79.67	79.5
Zm00001d038579_P001	Maize	plastid	79.05	79.38
TraesCS1A01G313300.1	Wheat	plastid	78.42	79.08
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	78.42	79.08
Os05t0496200-01	Rice	extracellular, plastid	79.25	78.93
CDY49746	Canola	plastid	60.58	75.26
Zm00001d043194_P001	Maize	plastid	53.73	69.62
TraesCS1B01G325100.1	Wheat	golgi	78.42	66.55
CDX79325	Canola	cytosol	43.57	62.87
Os01t0800266-00	Rice	extracellular	39.63	60.44
CDY52872	Canola	cytosol	80.29	48.56

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
GO:A0A078EMW0	EnsemblPlants:CDY00798	ProteinID:CDY00798	ProteinID:CDY00798.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00110696001	InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477
ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6886
MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf
SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EC7248	SEG:seg	:	:

Description

BnaC03g37820D

Coordinates

chrLK031921:-:1195162..1197901

Molecular Weight (calculated)

50257.9 Da

IEP (calculated)

7.618

GRAVY (calculated)

0.174

Length

482 amino acids

Sequence
(BLAST)

001: MASVAASPAF SLLKSTGATA SSAATRARAS LLPIPSSKSI SARPLGFSAV LDSRRFSLHV SSKVQSVRGR GSRGVVSMAK KSVGDLTSAD LKGKKVFVRA
101: DLNVPLDDNQ TITDDTRIRA AVPTIKYLIE NGAKVILSTH LGRPKGVTPK FSLAPLVPRL SELLGIEVKK ADDCIGPEVE SLVASLPEGG VLLLENVRFY
201: KEEEKNDPEF AKKLASLADL YVNDAFGTAH RAHASTEGVT KFLKPSVAGF LLQKELDYLV GAVSSPKRPF AAIVGGSKVS SKIGVIESLL EKCDILLLGG
301: GMIFTFYKAQ GLSVGSSLVE EDKLELATSL LAKAKAKGVS LLLPTDVVVA DKFAPDANSK VVPASGIEDG WMGLDIGPDS IKTFNEALDT TQTVIWNGPM
401: GVFEMEKFAA GTEAVANKLA ELSEKGVTTI IGGGDSVAAV EKVGVAGVMS HISTGGGASL ELLEGKVLPG VIALDEAITV TV

Best Arabidopsis Sequence Match ( AT3G12780.1 )
(BLAST)

001: MASAAASSAF SLLKSTGAVA SSAGTRARAS LLPIPSTSVS ARPLGFSATL DSRRFSLHVA SKVESVRGKG SRGVVSMAKK SVGDLTSADL KGKKVFVRAD
101: LNVPLDDNQT ITDDTRIRAA IPTIKYLIEN GAKVILSTHL GRPKGVTPKF SLAPLVPRLS ELLGIEVTKA DDCIGPEVES LVASLPEGGV LLLENVRFYK
201: EEEKNDPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSNPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATELL AKAKAKGVSL LLPTDVVVAD KFAPDANSKI VPASGIEDGW MGLDIGPDSI KTFNEALDTT QTVIWNGPMG
401: VFEMEKFAAG TEAIANKLAE LSEKGVTTII GGGDSVAAVE KVGVAGVMSH ISTGGGASLE LLEGKVLPGV IALDEAIPVT V

Arabidopsis Description

PGK1Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178V5M8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.