Factsheet for Zm00001d038579_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 20089766
extracellular: 20408568
plastid: 22065420
extracellular: 22192489
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19743	Sorghum	plastid	94.58	94.0
Zm00001d010672_P001	Maize	cytosol	35.42	93.92
HORVU1Hr1G067300.1	Barley	plastid	75.62	88.97
Os05t0496200-01	Rice	extracellular, plastid	87.29	86.57
TraesCS1A01G313300.1	Wheat	plastid	85.62	85.98
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	85.42	85.77
Bra034731.1-P	Field mustard	cytosol	18.75	84.91
GSMUA_Achr4P33150_001	Banana	plasma membrane	80.42	80.58
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	80.21	80.54
Zm00001d015376_P002	Maize	cytosol	66.88	79.85
KRH13755	Soybean	endoplasmic reticulum, nucleus	79.79	79.3
Bra039342.1-P	Field mustard	plastid	79.17	79.17
CDY00798	Canola	plastid	79.38	79.05
CDY43401	Canola	plastid	78.96	78.96
CDX73803	Canola	plastid	79.58	78.93
CDY24247	Canola	plastid	78.96	78.79
GSMUA_Achr6P00200_001	Banana	plastid	78.75	78.75
Bra001470.1-P	Field mustard	plastid	79.38	78.72
KRH43699	Soybean	endoplasmic reticulum, nucleus	79.38	78.56
AT1G56190.1	Thale cress	plastid	78.12	78.45
AT3G12780.1	Thale cress	plastid	78.54	78.38
Solyc07g066610.2.1	Tomato	plastid	78.12	77.8
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	78.12	77.8
Zm00001d043194_P001	Maize	plastid	58.96	76.08
Bra034729.1-P	Field mustard	plastid	58.54	74.73
TraesCS1B01G325100.1	Wheat	golgi	86.25	72.89
CDY52872	Canola	cytosol	71.04	42.79
Zm00001d032867_P002	Maize	mitochondrion, plastid	22.08	15.87

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
UniProt:A0A1D6M7C2	ProteinID:AQK86959.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004618
GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724
PRINTS:PR00477	ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniParc:UPI0001CAA1AE	EnsemblPlantsGene:Zm00001d038579	EnsemblPlants:Zm00001d038579_P001
EnsemblPlants:Zm00001d038579_T001	SEG:seg	:	:	:	:

Description

Phosphoglycerate kinase

Coordinates

chr6:-:160393660..160396437

Molecular Weight (calculated)

49842.3 Da

IEP (calculated)

6.693

GRAVY (calculated)

0.189

Length

480 amino acids

Sequence
(BLAST)

001: MASAAAPPTS LSLAARAATR AAAAAAAPLR RGGLATACQP ARSLAFAAGD ARLAVHVASR CRQAFSGRGT RAMATMAKKS VGELTEADLE GKRVFVRADL
101: NVPLDENQNI TDDTRIRAAI PTIQYILSKG AKVILSSHLG RPKGFTPKFS LAPLVGRLSE LLGIQVQKAD DVIGPEVEKL VAALPNGGVL LLENVRFYKE
201: EEKNDPEFAQ KLASLADLYV NDAFGTAHRA HASTEGVTKF LQPSVAGFLL QKELDYLVGA VSSPKRPFAA IVGGSKVSSK IGVIESLLEK CDILLLGGGM
301: IFTFYKAQGL PVGASLVEED KLELATSLLA KAKEKGVSLM LPTDVVIADK FAPDANSQIV PASAIPDGWM GLDIGPDSVA SFNAALDTTK TVIWNGPMGV
401: FEFDKFAVGT EAVAKKLAEL SGKGVTTIIG GGDSVAAVEK VGVADVMSHI STGGGASLEL LEGKELPGVV ALNEAATVTV

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.