Factsheet for VIT_19s0085g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010672_P001	Maize	cytosol	33.89	89.5
HORVU1Hr1G067300.1	Barley	plastid	74.9	87.75
Bra034731.1-P	Field mustard	cytosol	19.04	85.85
VIT_19s0085g00370.t01	Wine grape	cytosol	70.5	84.04
Solyc07g066610.2.1	Tomato	plastid	83.68	82.99
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	83.68	82.99
AT3G12780.1	Thale cress	plastid	83.26	82.74
AT1G56190.1	Thale cress	plastid	82.22	82.22
KRH43699	Soybean	endoplasmic reticulum, nucleus	83.26	82.06
CDY43401	Canola	plastid	82.22	81.88
Bra039342.1-P	Field mustard	plastid	82.22	81.88
GSMUA_Achr6P00200_001	Banana	plastid	82.01	81.67
KRH13755	Soybean	endoplasmic reticulum, nucleus	82.43	81.57
CDY24247	Canola	plastid	82.01	81.5
GSMUA_Achr4P33150_001	Banana	plasma membrane	81.59	81.42
CDY00798	Canola	plastid	82.01	81.33
CDX73803	Canola	plastid	82.01	80.99
Bra001470.1-P	Field mustard	plastid	81.8	80.79
Bra034729.1-P	Field mustard	plastid	63.18	80.32
Zm00001d038579_P001	Maize	plastid	80.54	80.21
Os05t0496200-01	Rice	extracellular, plastid	81.17	80.17
EES19743	Sorghum	plastid	79.92	79.09
TraesCS1A01G313300.1	Wheat	plastid	78.66	78.66
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	78.24	78.24
Zm00001d043194_P001	Maize	plastid	55.65	71.51
TraesCS1B01G325100.1	Wheat	golgi	78.66	66.2
Os01t0800266-00	Rice	extracellular	39.33	59.49
CDY52872	Canola	cytosol	74.69	44.79
VIT_08s0040g01440.t01	Wine grape	cytosol	23.01	18.93

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	EntrezGene:100249576	wikigene:100249576	MapMan:2.1.1.5
MapMan:3.12.5	Gene3D:3.40.50.1260	UniProt:A5CAF8	EMBL:AM488092	ProteinID:CAN81990	ProteinID:CAN81990.1
ProteinID:CCB49006	ProteinID:CCB49006.1	EMBL:FN595503	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR015824	EntrezGene:LOC100249576	wikigene:LOC100249576
HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	ScanProsite:PS00111	PANTHER:PTHR11406
PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748
TIGR:TC61358	TIGR:TC66102	UniParc:UPI0001524ED3	ArrayExpress:VIT_19s0085g00380	EnsemblPlantsGene:VIT_19s0085g00380	EnsemblPlants:VIT_19s0085g00380.t01
unigene:Vvi.6890	RefSeq:XP_002263796	RefSeq:XP_002263796.1	SEG:seg	:	:

Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A5CAF8]

Coordinates

chr19:-:22741112..22745792

Molecular Weight (calculated)

50085.9 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.162

Length

478 amino acids

Sequence
(BLAST)

001: MASAAASPSS LSLLHSTSAA RSSPRLPSAS LRLPTLPLRR LGFAGAAADS LLTLHVASRT RSFRGKASRG VVSMAKKSVG DLTGADLKGK KVFVRVDLNV
101: PLDDNQKITD DTRVRAAIPT IKYLIDNGAK VILSSHLGRP KGVTPKFSLA PLVPRLSELL GIQIVKADDC IGPEVEKLVT ALPDGGVLLL ENVRFYKEEE
201: KNEPEFAKKL ASIADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS SPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL SLATSLLEKA KAKGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSIKIF NEALETTKTV IWNGPMGVFE
401: FDKFAEGTVA VAKKLAELSG KDVTTIIGGG DSVAAVEKVG VADVMSHIST GGGASLELLE GKELPGVVAL DEATPVPV

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.