Factsheet for TraesCS1B01G325100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	83.27	98.95
TraesCS1A01G313300.1	Wheat	plastid	82.92	98.54
HORVU1Hr1G067300.1	Barley	plastid	69.72	97.06
Os05t0496200-01	Rice	extracellular, plastid	74.3	87.19
Bra034731.1-P	Field mustard	cytosol	16.2	86.79
Zm00001d038579_P001	Maize	plastid	72.89	86.25
Zm00001d010672_P001	Maize	cytosol	27.46	86.19
EES19743	Sorghum	plastid	73.06	85.92
TraesCS6B01G187500.2	Wheat	golgi	57.57	81.55
GSMUA_Achr4P33150_001	Banana	plasma membrane	68.31	81.0
KRH13755	Soybean	endoplasmic reticulum, nucleus	68.49	80.54
GSMUA_Achr6P00200_001	Banana	plastid	67.96	80.42
KRH43699	Soybean	endoplasmic reticulum, nucleus	68.31	80.0
AT1G56190.1	Thale cress	plastid	66.9	79.5
CDX73803	Canola	plastid	67.61	79.34
CDY43401	Canola	plastid	66.9	79.17
Bra001470.1-P	Field mustard	plastid	67.25	78.93
CDY24247	Canola	plastid	66.73	78.79
AT3G12780.1	Thale cress	plastid	66.73	78.79
Bra039342.1-P	Field mustard	plastid	66.55	78.75
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	66.2	78.66
CDY00798	Canola	plastid	66.55	78.42
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	66.55	78.42
Solyc07g066610.2.1	Tomato	plastid	66.55	78.42
TraesCS7B01G375300.1	Wheat	cytosol	54.05	76.56
Bra034729.1-P	Field mustard	plastid	49.3	74.47
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	15.14	61.87
CDY52872	Canola	cytosol	61.97	44.17
TraesCS1B01G157400.1	Wheat	plastid	20.25	17.19
TraesCS7B01G381700.1	Wheat	cytosol	4.58	16.77

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PRINTS:PR00477
ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N
InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	EnsemblPlantsGene:TraesCS1B01G325100	EnsemblPlants:TraesCS1B01G325100.1	TIGR:cd00318	SEG:seg

Description

No Description!

Coordinates

chr1B:-:551011328..551014062

Molecular Weight (calculated)

59091.5 Da

IEP (calculated)

9.936

GRAVY (calculated)

0.071

Length

568 amino acids

Sequence
(BLAST)

001: MLRRFQAQIR RRRGARGTHT VAIAVIAGGP SPTHPPQPPS RPLASDKQIP PASTSSTKAP FFTTPTPTSL LLSTRPSSPI PAPAPAPMAS TAAPPAALVA
101: RRAASASAAA APLRRAGLAA GCQPARSLAF AAGADPRLAV HVASRCRAAS AARGTRAVAT MAKKSVGDLT AADLEGKRVL VRADLNVPLD DNQNITDDTR
201: IRAAIPTIKY LLSNGAKVIL TSHLGRPKGV TPKFSLAPLV PRLSELLGIA VKKAEDVIGP EVEKLVADLE NGAVLLLENV RFYKEEEKND PEFAKKLASL
301: ADLFVNDAFG TAHRAHASTE GVTKFLKPSV AGFLLQKELD YLDGAVSNPK RPFAAIVGGS KVSSKIGVIE SLLEKCDILL LGGGMIFTFY KAQGLSVGSS
401: LVEEDKLELA TSLLAKAKAK GVSLLLPSDV IIADKFAPDA NSQTVPASAI PDGWMGLDIG PDSVKTFNDA LDTTQTIIWN GPMGVFEFDK FAVGTESIAK
501: KLAELSKKGV TTIIGGGDSV AAVEKVGVAD VMSHISTGGG ASLELLEGKE LPGVVALDEG VMTRSVTV

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.