Factsheet for Os05t0496200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339
extracellular: 18986194
plastid: 21433289
extracellular: 23159799
extracellular: 24083427
nucleus: 24133045
plasma membrane: 27800704
plastid: 27992503
extracellular: 28232208

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

msms PMID: 18986194 doi

YH Jung, SH Jeong, SH Kim, R Singh, JE Lee, YS Cho, GK Agrawal, R Rakwal, NS Jwa

Department of Molecular Biology, Sejong University, Gunja-dong, Seoul 143-747, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G067300.1	Barley	plastid	75.83	89.95
Zm00001d010672_P001	Maize	cytosol	33.47	89.5
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	86.57	87.66
TraesCS1A01G313300.1	Wheat	plastid	86.57	87.66
Zm00001d038579_P001	Maize	plastid	86.57	87.29
EES19743	Sorghum	plastid	86.78	86.96
Bra034731.1-P	Field mustard	cytosol	18.59	84.91
KRH13755	Soybean	endoplasmic reticulum, nucleus	83.26	83.44
KRH43699	Soybean	endoplasmic reticulum, nucleus	83.06	82.89
GSMUA_Achr6P00200_001	Banana	plastid	80.79	81.46
GSMUA_Achr4P33150_001	Banana	plasma membrane	80.37	81.21
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	80.17	81.17
Solyc07g066610.2.1	Tomato	plastid	79.75	80.08
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	79.75	80.08
CDX73803	Canola	plastid	79.75	79.75
AT3G12780.1	Thale cress	plastid	79.13	79.63
Bra039342.1-P	Field mustard	plastid	78.93	79.58
CDY43401	Canola	plastid	78.93	79.58
Bra001470.1-P	Field mustard	plastid	79.34	79.34
CDY00798	Canola	plastid	78.93	79.25
CDY24247	Canola	plastid	78.72	79.21
Os06t0668200-01	Rice	nucleus, plasma membrane	65.5	79.05
AT1G56190.1	Thale cress	plastid	77.69	78.66
Os02t0169300-01	Rice	extracellular, plasma membrane	65.08	78.36
Bra034729.1-P	Field mustard	plastid	59.3	76.33
TraesCS1B01G325100.1	Wheat	golgi	87.19	74.3
Os01t0800266-00	Rice	extracellular	45.45	69.62
CDY52872	Canola	cytosol	71.69	43.54
Os10t0442100-00	Rice	cytosol	23.35	18.59

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
EntrezGene:4339204	UniProt:A0A0P0WP33	ProteinID:BAS94712.1	ProteinID:BAS94713.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR015824	HAMAP:MF_00145
EnsemblPlantsGene:Os05g0496200	EnsemblPlants:Os05t0496200-01	PFAM:PF00162	PRINTS:PR00477	ScanProsite:PS00111	PANTHER:PTHR11406
PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748
UniParc:UPI0001C7BFFD	RefSeq:XP_015639410.1	SEG:seg	:	:	:

Description

PHOSPHOGLYCERATE KINASE 3Similar to 3-phosphoglycerate kinase (Fragment). (Os05t0496200-01);Similar to phosphoglycerate kinase. (Os05t0496200-02);Similar to phosphoglycerate kinase. (Os05t0496200-03)

Coordinates

chr5:-:24378361..24381743

Molecular Weight (calculated)

50140.4 Da

IEP (calculated)

6.693

GRAVY (calculated)

0.171

Length

484 amino acids

Sequence
(BLAST)

001: MASAAAPTTS SLSLAARRAA AVGPAAASPL RRGGLAAGCQ PARSLAFAAA ADPRLATHVA SRCRQAASSS SRGTRAVATM AKKSVGDLTA ADLEGKRVFV
101: RADLNVPLDD NQNITDDTRV RAAIPTIQYL IKNGAKVILS SHLGRPKGVT PKFSLAPLVP RLSELLGIQV TKAEDVIGPD VEKLVSELPN GSVLLLENVR
201: FYKEEEKNDP EFAKKLASLA DLYVNDAFGT AHRAHASTEG VTKFLKPSVA GFLLQKELDY LVGAVSSPKR PFAAIVGGSK VSSKIGVIES LLEKCDILLL
301: GGGMIFTFYK AQGLSVGSSL VEEDKLELAT SLLAKAKEKG VSLLLPSDVI IADKFAPDAN SQVVPASAIP DGWMGLDIGP DSVASFSSTL ETTQTVIWNG
401: PMGVFEFDKF AVGTEAIAKK LADLSGKGVT TIIGGGDSVA AVEKVGVADV MSHISTGGGA SLELLEGKEL PGVIALDEAV TVAV

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.