Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
extracellular: 22364583 plastid: 22908117 nucleus: 25464976 plastid: 26371478 plastid: 28183294 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
22364583
doi
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID:
28183294
doi
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400056870 | Potato | cytosol, extracellular, plastid | 98.13 | 98.13 |
Bra034731.1-P | Field mustard | cytosol | 19.92 | 90.57 |
HORVU1Hr1G067300.1 | Barley | plastid | 74.69 | 88.24 |
Zm00001d010672_P001 | Maize | cytosol | 32.99 | 87.85 |
Solyc07g066600.2.1 | Tomato | nucleus, plastid | 70.54 | 84.79 |
VIT_19s0085g00380.t01 | Wine grape | extracellular, plastid | 82.99 | 83.68 |
KRH43699 | Soybean | endoplasmic reticulum, nucleus | 83.19 | 82.68 |
KRH13755 | Soybean | endoplasmic reticulum, nucleus | 82.57 | 82.4 |
AT1G56190.1 | Thale cress | plastid | 81.54 | 82.22 |
AT3G12780.1 | Thale cress | plastid | 81.54 | 81.7 |
GSMUA_Achr6P00200_001 | Banana | plastid | 81.33 | 81.67 |
GSMUA_Achr4P33150_001 | Banana | plasma membrane | 81.12 | 81.63 |
CDY43401 | Canola | plastid | 80.91 | 81.25 |
Bra039342.1-P | Field mustard | plastid | 80.91 | 81.25 |
CDY24247 | Canola | plastid | 80.5 | 80.67 |
CDX73803 | Canola | plastid | 80.91 | 80.58 |
CDY00798 | Canola | plastid | 80.5 | 80.5 |
Bra001470.1-P | Field mustard | plastid | 80.71 | 80.37 |
Os05t0496200-01 | Rice | extracellular, plastid | 80.08 | 79.75 |
TraesCS1A01G313300.1 | Wheat | plastid | 78.42 | 79.08 |
TraesCS1D01G313800.2 | Wheat | golgi, plastid, unclear | 78.22 | 78.87 |
Zm00001d038579_P001 | Maize | plastid | 77.8 | 78.12 |
EES19743 | Sorghum | plastid | 77.8 | 77.64 |
Bra034729.1-P | Field mustard | plastid | 60.37 | 77.39 |
Zm00001d043194_P001 | Maize | plastid | 54.56 | 70.7 |
TraesCS1B01G325100.1 | Wheat | golgi | 78.42 | 66.55 |
Os01t0800266-00 | Rice | extracellular | 39.0 | 59.49 |
CDY52872 | Canola | cytosol | 73.44 | 44.42 |
Solyc09g008130.2.1 | Tomato | cytosol | 25.1 | 17.72 |
Protein Annotations
KEGG:00010+2.7.2.3 | KEGG:00710+2.7.2.3 | MapMan:1.2.2 | MapMan:2.1.1.5 | MapMan:3.12.5 | Gene3D:3.40.50.1260 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004618 | GO:GO:0005488 | GO:GO:0005524 |
GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
InterPro:IPR015824 | UniProt:K4CHY4 | HAMAP:MF_00145 | PFAM:PF00162 | PIRSF:PIRSF000724 | PRINTS:PR00477 |
ScanProsite:PS00111 | PANTHER:PTHR11406 | PANTHER:PTHR11406:SF11 | InterPro:Phosphoglycerate_kinase | InterPro:Phosphoglycerate_kinase_CS | InterPro:Phosphoglycerate_kinase_N |
InterPro:Phosphoglycerate_kinase_sf | SUPFAM:SSF53748 | EnsemblPlantsGene:Solyc07g066610.2 | EnsemblPlants:Solyc07g066610.2.1 | UniParc:UPI000276B67A | SEG:seg |
Description
Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:K4CHY4]
Coordinates
chr7:-:67986192..67988660
Molecular Weight (calculated)
50455.0 Da
IEP (calculated)
8.076
GRAVY (calculated)
0.127
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MASATASHTL CGIPTTSSSS TTNKSTTYSS ARFLLKTPLR RLGFAGTVAD PLFTNHVATK LRSVKASSNP VRAVVSMAKK SVGDLSSSDL KGKKVFVRAD
101: LNVPLDDSQN ITDDTRIRAA IPTIKHLIAN GAKVILSSHL GRPKGVTPKY SLAPLVPRLS ELLGIQVVKA DDCIGPEVDK LVDSLPEGGV LLLENVRFYK
201: EEEKNEPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSTPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATSLL EKAKAKGVSL LLPSDVVIAD KFAPDANSKI VPASAIPDGW MGLDIGPDSI KTFNDALDTT KTVIWNGPMG
401: VFEFDKFATG TEAIAKKLAD LSGKGVTTII GGGDSVAAVE KVGVASVMSH ISTGGGASLE LLEGKVLPGV IALDEADAPV AV
101: LNVPLDDSQN ITDDTRIRAA IPTIKHLIAN GAKVILSSHL GRPKGVTPKY SLAPLVPRLS ELLGIQVVKA DDCIGPEVDK LVDSLPEGGV LLLENVRFYK
201: EEEKNEPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSTPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATSLL EKAKAKGVSL LLPSDVVIAD KFAPDANSKI VPASAIPDGW MGLDIGPDSI KTFNDALDTT KTVIWNGPMG
401: VFEFDKFATG TEAIAKKLAD LSGKGVTTII GGGDSVAAVE KVGVASVMSH ISTGGGASLE LLEGKVLPGV IALDEADAPV AV
001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV
Arabidopsis Description
Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.