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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034731.1-P Field mustard cytosol 21.83 99.06
CDY00798 Canola plastid 95.22 95.02
Bra001470.1-P Field mustard plastid 95.22 94.63
CDX73803 Canola plastid 95.22 94.63
CDY24247 Canola plastid 92.93 92.93
Bra039342.1-P Field mustard plastid 92.72 92.92
CDY43401 Canola plastid 92.72 92.92
AT1G56190.1 Thale cress plastid 88.57 89.12
HORVU1Hr1G067300.1 Barley plastid 75.05 88.48
Bra034729.1-P Field mustard plastid 68.81 88.03
Zm00001d010672_P001 Maize cytosol 32.64 86.74
AT1G79550.2 Thale cress cytosol 70.06 84.04
VIT_19s0085g00380.t01 Wine grape extracellular, plastid 82.74 83.26
PGSC0003DMT400056870 Potato cytosol, extracellular, plastid 82.33 82.16
Solyc07g066610.2.1 Tomato plastid 81.7 81.54
KRH43699 Soybean endoplasmic reticulum, nucleus 82.12 81.44
GSMUA_Achr4P33150_001 Banana plasma membrane 80.67 81.0
KRH13755 Soybean endoplasmic reticulum, nucleus 80.46 80.12
GSMUA_Achr6P00200_001 Banana plastid 79.42 79.58
TraesCS1A01G313300.1 Wheat plastid 78.79 79.29
TraesCS1D01G313800.2 Wheat golgi, plastid, unclear 78.79 79.29
Os05t0496200-01 Rice extracellular, plastid 79.63 79.13
EES19743 Sorghum plastid 79.0 78.67
Zm00001d038579_P001 Maize plastid 78.38 78.54
Zm00001d043194_P001 Maize plastid 54.26 70.16
TraesCS1B01G325100.1 Wheat golgi 78.79 66.73
Os01t0800266-00 Rice extracellular 38.88 59.18
CDY52872 Canola cytosol 80.67 48.68
Protein Annotations
KEGG:00010+2.7.2.3KEGG:00710+2.7.2.3MapMan:1.2.2MapMan:2.1.1.5MapMan:3.12.5Gene3D:3.40.50.1260
EntrezGene:820461UniProt:A0A178V5M8ProteinID:AEE75246.1EMBL:AF247558EMBL:AF360234EMBL:AF428418
EMBL:AK227225EMBL:AK316922ArrayExpress:AT3G12780EnsemblPlantsGene:AT3G12780RefSeq:AT3G12780TAIR:AT3G12780
RefSeq:AT3G12780-TAIR-GEnsemblPlants:AT3G12780.1TAIR:AT3G12780.1EMBL:AY045623EMBL:AY059841EMBL:AY062953
EMBL:AY093998EMBL:AY114638EMBL:AY126991Unigene:At.20378ProteinID:BAB02423.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004618GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0005739GO:GO:0005829GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009409GO:GO:0009507GO:GO:0009536GO:GO:0009570
GO:GO:0009579GO:GO:0009628GO:GO:0009941GO:GO:0009987GO:GO:0010319GO:GO:0015979
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019253GO:GO:0019538
GO:GO:0030312GO:GO:0046686GO:GO:0048046InterPro:IPR015824HAMAP:MF_00145RefSeq:NP_187884.1
ProteinID:OAP01497.1PFAM:PF00162Symbol:PGK1PIRSF:PIRSF000724PO:PO:0000005PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0005020PO:PO:0006339PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00477ScanProsite:PS00111
PANTHER:PTHR11406PANTHER:PTHR11406:SF11InterPro:Phosphoglycerate_kinaseInterPro:Phosphoglycerate_kinase_CSInterPro:Phosphoglycerate_kinase_NInterPro:Phosphoglycerate_kinase_sf
UniProt:Q9LD57SUPFAM:SSF53748EMBL:U37701UniParc:UPI00000A55BCSEG:seg:
Description
PGK1Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178V5M8]
Coordinates
chr3:-:4060920..4063306
Molecular Weight (calculated)
50114.6 Da
IEP (calculated)
6.109
GRAVY (calculated)
0.176
Length
481 amino acids
Sequence
(BLAST)
001: MASAAASSAF SLLKSTGAVA SSAGTRARAS LLPIPSTSVS ARPLGFSATL DSRRFSLHVA SKVESVRGKG SRGVVSMAKK SVGDLTSADL KGKKVFVRAD
101: LNVPLDDNQT ITDDTRIRAA IPTIKYLIEN GAKVILSTHL GRPKGVTPKF SLAPLVPRLS ELLGIEVTKA DDCIGPEVES LVASLPEGGV LLLENVRFYK
201: EEEKNDPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSNPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATELL AKAKAKGVSL LLPTDVVVAD KFAPDANSKI VPASGIEDGW MGLDIGPDSI KTFNEALDTT QTVIWNGPMG
401: VFEMEKFAAG TEAIANKLAE LSEKGVTTII GGGDSVAAVE KVGVAGVMSH ISTGGGASLE LLEGKVLPGV IALDEAIPVT V
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.