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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 8
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
extracellular: 26072143
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043194_P001 Maize plastid 58.86 50.0
Os05t0496200-01 Rice extracellular, plastid 69.62 45.45
Bra034729.1-P Field mustard plastid 51.27 43.09
KRH43699 Soybean endoplasmic reticulum, nucleus 62.97 41.03
GSMUA_Achr4P33150_001 Banana plasma membrane 61.71 40.71
GSMUA_Achr6P00200_001 Banana plastid 61.08 40.21
KRH13755 Soybean endoplasmic reticulum, nucleus 61.08 39.96
CDY00798 Canola plastid 60.44 39.63
CDX73803 Canola plastid 60.44 39.46
Bra001470.1-P Field mustard plastid 60.44 39.46
VIT_19s0085g00380.t01 Wine grape extracellular, plastid 59.49 39.33
AT1G56190.1 Thale cress plastid 59.18 39.12
Solyc07g066610.2.1 Tomato plastid 59.49 39.0
Bra039342.1-P Field mustard plastid 59.18 38.96
CDY43401 Canola plastid 59.18 38.96
AT3G12780.1 Thale cress plastid 59.18 38.88
CDY24247 Canola plastid 59.18 38.88
PGSC0003DMT400056870 Potato cytosol, extracellular, plastid 58.86 38.59
Os06t0668200-01 Rice nucleus, plasma membrane 47.78 37.66
Os02t0169300-01 Rice extracellular, plasma membrane 46.2 36.32
CDY52872 Canola cytosol 58.86 23.34
Bra034731.1-P Field mustard cytosol 4.43 13.21
Os10t0442100-00 Rice cytosol 16.77 8.72
Protein Annotations
KEGG:00010+2.7.2.3KEGG:00710+2.7.2.3Gene3D:3.40.50.1260MapMan:35.1UniProt:A0A0P0V994ProteinID:BAS74789.1
GO:GO:0003674GO:GO:0003824GO:GO:0004618GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016740InterPro:IPR015824EnsemblPlantsGene:Os01g0800266EnsemblPlants:Os01t0800266-00
PFAM:PF00162PRINTS:PR00477ScanProsite:PS00111PANTHER:PTHR11406PANTHER:PTHR11406:SF11InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_CSInterPro:Phosphoglycerate_kinase_NInterPro:Phosphoglycerate_kinase_sfSUPFAM:SSF53748UniParc:UPI00039395F7SEG:seg
Description
PHOSPHOGLYCERATE KINASE 1Similar to Phosphoglycerate kinase. (Os01t0800266-00)
Coordinates
chr1:+:33884788..33887413
Molecular Weight (calculated)
32564.8 Da
IEP (calculated)
9.351
GRAVY (calculated)
0.319
Length
316 amino acids
Sequence
(BLAST)
001: MIRCSQSQIL SLSPKKSSLS LLPALHDCTQ LLPMASVAAT TFPSMARPAA RGIVAGAAAS TVPLPRAGVA SPCPTARSLG FAARGTDPRL AIHVSSRRRA
101: ASASAGSRLA RAVATMAKKS VGDLAAADLE GKRVLLRADL NVPLDASQNI TDDTRVIAAI PTIKHLIGNG AKVILCSHLE LDYLVGAVSN PKRPFAAIVG
201: GSKVSSKIGV IESLLEKCDI LLLGGGMIFT FYKAQGFPVG ASLVEDDKLE LATSLLAKAK EKGVSLMLPT DVIVADKFAP EANCQVVSAS AIPDGWMGLD
301: IGPDSVAAFS SALETT
Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)
001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV
Arabidopsis Description
Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.