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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 18372294
plasma membrane: 18557835
plasma membrane: 19502382
nucleus: 23777608
extracellular: 24083427
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503
extracellular: 28232208
msms PMID: 23777608 doi
H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015376_P002 Maize cytosol 93.78 93.78
KXG29557 Sorghum cytosol 93.78 93.78
TraesCS6B01G187500.2 Wheat golgi 91.29 91.52
TraesCS6A01G158300.1 Wheat cytosol 91.29 91.52
Os06t0668200-01 Rice nucleus, plasma membrane 91.29 91.52
KRH13759 Soybean mitochondrion 72.39 86.61
GSMUA_Achr1P25780_001 Banana cytosol 86.32 86.53
TraesCS6D01G148700.2 Wheat cytosol 91.54 85.98
GSMUA_Achr5P00330_001 Banana cytosol 85.07 85.29
AT1G79550.2 Thale cress cytosol 85.07 85.29
Bra008421.1-P Field mustard cytosol 85.07 85.29
VIT_19s0085g00370.t01 Wine grape cytosol 84.83 85.04
Bra035124.1-P Field mustard cytosol 84.83 85.04
GSMUA_Achr11P... Banana cytosol 84.58 84.79
Solyc07g066600.2.1 Tomato nucleus, plastid 84.33 84.54
PGSC0003DMT400056871 Potato cytosol 84.33 84.54
GSMUA_Achr8P33470_001 Banana cytosol 84.08 84.29
Bra003605.1-P Field mustard cytosol 83.58 83.79
KRH13758 Soybean peroxisome 12.19 75.38
HORVU6Hr1G031830.4 Barley plasma membrane 91.04 67.03
Os05t0496200-01 Rice extracellular, plastid 78.36 65.08
CDX79325 Canola cytosol 53.73 64.67
HORVU4Hr1G055460.8 Barley cytosol 42.79 46.49
Os01t0800266-00 Rice extracellular 36.32 46.2
Os10t0442100-00 Rice cytosol 25.87 17.11
Protein Annotations
KEGG:00010+2.7.2.3KEGG:00710+2.7.2.3MapMan:2.1.1.5Gene3D:3.40.50.1260EntrezGene:4328435ProteinID:BAD25722.1
ProteinID:BAF07934.1ProteinID:BAS77184.1ProteinID:EEE56393.1EMBL:EF122488GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004618GO:GO:0005488GO:GO:0005524GO:GO:0005975GO:GO:0006091
GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740InterPro:IPR015824HAMAP:MF_00145
EnsemblPlantsGene:Os02g0169300EnsemblPlants:Os02t0169300-01PFAM:PF00162PIRSF:PIRSF000724PRINTS:PR00477ScanProsite:PS00111
PANTHER:PTHR11406PANTHER:PTHR11406:SF11InterPro:Phosphoglycerate_kinaseInterPro:Phosphoglycerate_kinase_CSInterPro:Phosphoglycerate_kinase_NInterPro:Phosphoglycerate_kinase_sf
UniProt:Q6H6C7SUPFAM:SSF53748UniParc:UPI00003B452ERefSeq:XP_015625860.1SEG:seg:
Description
PHOSPHOGLYCERATE KINASE 2Similar to Phosphoglycerate kinase, cytosolic (EC 2.7.2.3). (Os02t0169300-01)
Coordinates
chr2:+:3727551..3731217
Molecular Weight (calculated)
42110.1 Da
IEP (calculated)
5.574
GRAVY (calculated)
0.136
Length
402 amino acids
Sequence
(BLAST)
001: MATKRSVGTL GEADLRGKKV FVRADLNVPL DDAQKITDDT RIRASVPTVK FLLEKGAKVI LASHLGRPKG VTPKYSLKPL VPRLSELLGV DVVMANDCIG
101: EEVEKLAAAL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAA VADLYVNDAF GTAHRAHAST EGVTKFLKPA VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLAKVDVL ILGGGMIFTF YKAQGYAVGK SLVEEDKLEL ATSLIEKAKA KGVSLLLPTD VVVADKFAAD AESKTVAASA IPDGWMGLDV
301: GPDAIKTSSE ALDTCNTIIW NGPMGVFEFE KFAAGTDAIA KKLADLTTTK GATTIIGGGD SVAAVEKAGL ADKMSHISTG GGASLELLEG KTLPGVLALD
401: EA
Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)
001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A
Arabidopsis Description
PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.