Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
18372294
plasma membrane: 18557835 plasma membrane: 19502382 nucleus: 23777608 extracellular: 24083427 golgi: 25047511 plasma membrane: 27800704 plastid: 27992503 extracellular: 28232208 |
msms PMID:
23777608
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
19502382
doi
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
24083427
doi
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID:
18372294
doi
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID:
25047511
doi
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d015376_P002 | Maize | cytosol | 93.78 | 93.78 |
KXG29557 | Sorghum | cytosol | 93.78 | 93.78 |
TraesCS6B01G187500.2 | Wheat | golgi | 91.29 | 91.52 |
TraesCS6A01G158300.1 | Wheat | cytosol | 91.29 | 91.52 |
Os06t0668200-01 | Rice | nucleus, plasma membrane | 91.29 | 91.52 |
KRH13759 | Soybean | mitochondrion | 72.39 | 86.61 |
GSMUA_Achr1P25780_001 | Banana | cytosol | 86.32 | 86.53 |
TraesCS6D01G148700.2 | Wheat | cytosol | 91.54 | 85.98 |
GSMUA_Achr5P00330_001 | Banana | cytosol | 85.07 | 85.29 |
AT1G79550.2 | Thale cress | cytosol | 85.07 | 85.29 |
Bra008421.1-P | Field mustard | cytosol | 85.07 | 85.29 |
VIT_19s0085g00370.t01 | Wine grape | cytosol | 84.83 | 85.04 |
Bra035124.1-P | Field mustard | cytosol | 84.83 | 85.04 |
GSMUA_Achr11P... | Banana | cytosol | 84.58 | 84.79 |
Solyc07g066600.2.1 | Tomato | nucleus, plastid | 84.33 | 84.54 |
PGSC0003DMT400056871 | Potato | cytosol | 84.33 | 84.54 |
GSMUA_Achr8P33470_001 | Banana | cytosol | 84.08 | 84.29 |
Bra003605.1-P | Field mustard | cytosol | 83.58 | 83.79 |
KRH13758 | Soybean | peroxisome | 12.19 | 75.38 |
HORVU6Hr1G031830.4 | Barley | plasma membrane | 91.04 | 67.03 |
Os05t0496200-01 | Rice | extracellular, plastid | 78.36 | 65.08 |
CDX79325 | Canola | cytosol | 53.73 | 64.67 |
HORVU4Hr1G055460.8 | Barley | cytosol | 42.79 | 46.49 |
Os01t0800266-00 | Rice | extracellular | 36.32 | 46.2 |
Os10t0442100-00 | Rice | cytosol | 25.87 | 17.11 |
Protein Annotations
KEGG:00010+2.7.2.3 | KEGG:00710+2.7.2.3 | MapMan:2.1.1.5 | Gene3D:3.40.50.1260 | EntrezGene:4328435 | ProteinID:BAD25722.1 |
ProteinID:BAF07934.1 | ProteinID:BAS77184.1 | ProteinID:EEE56393.1 | EMBL:EF122488 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004618 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005975 | GO:GO:0006091 |
GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR015824 | HAMAP:MF_00145 |
EnsemblPlantsGene:Os02g0169300 | EnsemblPlants:Os02t0169300-01 | PFAM:PF00162 | PIRSF:PIRSF000724 | PRINTS:PR00477 | ScanProsite:PS00111 |
PANTHER:PTHR11406 | PANTHER:PTHR11406:SF11 | InterPro:Phosphoglycerate_kinase | InterPro:Phosphoglycerate_kinase_CS | InterPro:Phosphoglycerate_kinase_N | InterPro:Phosphoglycerate_kinase_sf |
UniProt:Q6H6C7 | SUPFAM:SSF53748 | UniParc:UPI00003B452E | RefSeq:XP_015625860.1 | SEG:seg | : |
Description
PHOSPHOGLYCERATE KINASE 2Similar to Phosphoglycerate kinase, cytosolic (EC 2.7.2.3). (Os02t0169300-01)
Coordinates
chr2:+:3727551..3731217
Molecular Weight (calculated)
42110.1 Da
IEP (calculated)
5.574
GRAVY (calculated)
0.136
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKRSVGTL GEADLRGKKV FVRADLNVPL DDAQKITDDT RIRASVPTVK FLLEKGAKVI LASHLGRPKG VTPKYSLKPL VPRLSELLGV DVVMANDCIG
101: EEVEKLAAAL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAA VADLYVNDAF GTAHRAHAST EGVTKFLKPA VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLAKVDVL ILGGGMIFTF YKAQGYAVGK SLVEEDKLEL ATSLIEKAKA KGVSLLLPTD VVVADKFAAD AESKTVAASA IPDGWMGLDV
301: GPDAIKTSSE ALDTCNTIIW NGPMGVFEFE KFAAGTDAIA KKLADLTTTK GATTIIGGGD SVAAVEKAGL ADKMSHISTG GGASLELLEG KTLPGVLALD
401: EA
101: EEVEKLAAAL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAA VADLYVNDAF GTAHRAHAST EGVTKFLKPA VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLAKVDVL ILGGGMIFTF YKAQGYAVGK SLVEEDKLEL ATSLIEKAKA KGVSLLLPTD VVVADKFAAD AESKTVAASA IPDGWMGLDV
301: GPDAIKTSSE ALDTCNTIIW NGPMGVFEFE KFAAGTDAIA KKLADLTTTK GATTIIGGGD SVAAVEKAGL ADKMSHISTG GGASLELLEG KTLPGVLALD
401: EA
001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A
Arabidopsis Description
PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.