Factsheet for HORVU6Hr1G031830.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G187500.2	Wheat	golgi	72.89	99.25
TraesCS6A01G158300.1	Wheat	cytosol	72.89	99.25
TraesCS6D01G148700.2	Wheat	cytosol	72.89	92.99
Zm00001d015376_P002	Maize	cytosol	68.13	92.54
KXG29557	Sorghum	cytosol	67.58	91.79
Os02t0169300-01	Rice	extracellular, plasma membrane	67.03	91.04
HORVU7Hr1G108230.3	Barley	cytosol, mitochondrion, peroxisome	45.24	86.67
Bra008421.1-P	Field mustard	cytosol	63.55	86.53
Bra035124.1-P	Field mustard	cytosol	63.55	86.53
AT1G79550.2	Thale cress	cytosol	63.55	86.53
KRH13759	Soybean	mitochondrion	52.75	85.71
GSMUA_Achr5P00330_001	Banana	cytosol	62.82	85.54
GSMUA_Achr11P...	Banana	cytosol	62.64	85.29
GSMUA_Achr1P25780_001	Banana	cytosol	62.45	85.04
GSMUA_Achr8P33470_001	Banana	cytosol	62.27	84.79
PGSC0003DMT400056871	Potato	cytosol	62.27	84.79
Solyc07g066600.2.1	Tomato	nucleus, plastid	62.09	84.54
VIT_19s0085g00370.t01	Wine grape	cytosol	62.09	84.54
Bra003605.1-P	Field mustard	cytosol	62.09	84.54
HORVU1Hr1G067300.1	Barley	plastid	60.07	80.39
KRH13758	Soybean	peroxisome	9.34	78.46
CDX79325	Canola	cytosol	39.19	64.07
HORVU4Hr1G055460.8	Barley	cytosol	31.5	46.49
HORVU1Hr1G036990.6	Barley	plastid	19.96	16.17

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	UniProt:A0A287TTB0	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:HORVU6Hr1G031830
EnsemblPlants:HORVU6Hr1G031830.4	InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PRINTS:PR00477	ScanProsite:PS00111
PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf
SUPFAM:SSF53748	UniParc:UPI000B486517	SEG:seg	:	:	:

Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A287TTB0]

Coordinates

chrchr6H:-:136923953..136927448

Molecular Weight (calculated)

58322.9 Da

IEP (calculated)

10.173

GRAVY (calculated)

-0.125

Length

546 amino acids

Sequence
(BLAST)

001: SRPSRHFHAP RFSRTFPSFP FQNHPIQAVR RQSAGPEPTG AAPFLILPPL QAIPRQHPTK PSSPAATLSH PTLTPHVIGT RPPQIPPNIP SHRELRLGLS
101: IKKTGTHGQR RHIHPNRSQA KPIATPFHPQ PRPDRRRSDP PILHGMATKR SVGTLGEADL KGKKVFVRAD LNVPLDDAQK ITDDTRIRAS IPTIKYLLEK
201: GAKVILASHL GRPKGVTPKF SLKPLVPRLS ELLGLEVVMA PDCIGQEVEK LAAALPDGGV LLLENVRFYK EEEKNEPEFA KKLASVADLY VNDAFGTAHR
301: AHASTEGVTK FLRPSVAGFL MQKELDYLVG AVANPKKPFA AIVGGSKVSS KIGVIESLLA KVDILILGGG MIFTFYKAQG LAVGKSLVEE DKLELATSLI
401: ETAKSKGVKL LLPTDVVVAD KFAADAESKI VPATAIPDGW MGLDVGPDSI KTFAEALDTT KTVIWNGPMG VFEFEKFAAG TDAIAKQLAE LTGKGVTTII
501: GGGDSVAAVE KAGLADKMSH ISTGGGASLE LLEGKPLPGV LALDEA

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.