Factsheet for PGSC0003DMT400056871

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g066600.2.1	Tomato	nucleus, plastid	99.0	99.0
VIT_19s0085g00370.t01	Wine grape	cytosol	90.52	90.52
KRH43698	Soybean	endoplasmic reticulum, nucleus	90.52	90.52
AT1G79550.2	Thale cress	cytosol	89.53	89.53
CDX87375	Canola	cytosol	89.53	89.53
Bra035124.1-P	Field mustard	cytosol	89.28	89.28
Bra008421.1-P	Field mustard	cytosol	89.03	89.03
CDX88547	Canola	cytosol	77.81	88.64
CDY70232	Canola	cytosol	88.53	88.53
CDX67989	Canola	cytosol	76.56	88.22
CDX79326	Canola	cytosol	77.56	88.1
GSMUA_Achr11P...	Banana	cytosol	88.03	88.03
Bra003605.1-P	Field mustard	cytosol	87.53	87.53
GSMUA_Achr8P33470_001	Banana	cytosol	87.28	87.28
GSMUA_Achr1P25780_001	Banana	cytosol	87.03	87.03
GSMUA_Achr5P00330_001	Banana	cytosol	86.28	86.28
KXG29557	Sorghum	cytosol	85.79	85.57
Zm00001d015376_P002	Maize	cytosol	85.54	85.32
KXG20562	Sorghum	cytosol	85.04	85.04
TraesCS6A01G158300.1	Wheat	cytosol	84.79	84.79
Os02t0169300-01	Rice	extracellular, plasma membrane	84.54	84.33
Os06t0668200-01	Rice	nucleus, plasma membrane	83.54	83.54
TraesCS7D01G460800.1	Wheat	cytosol	82.04	82.04
CDY49746	Canola	plastid	77.56	80.15
TraesCS6D01G148700.2	Wheat	cytosol	85.04	79.67
HORVU7Hr1G108230.3	Barley	cytosol, mitochondrion, peroxisome	56.61	79.65
TraesCS7A01G473900.1	Wheat	cytosol	81.3	76.71
TraesCS7D01G460700.2	Wheat	cytosol	77.56	74.05
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	85.54	71.16
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	23.19	66.91
HORVU6Hr1G031830.4	Barley	plasma membrane	84.79	62.27
HORVU4Hr1G055460.8	Barley	cytosol	39.4	42.7
PGSC0003DMT400009906	Potato	cytosol, mitochondrion	26.18	22.98
TraesCS5A01G113800.1	Wheat	cytosol	7.73	20.0

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	ProteinID:ABB86242	ProteinID:ABB86242.1
ProteinID:ABB87110	ProteinID:ABB87110.1	EMBL:DQ241839	EMBL:DQ284454	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR015824	UniProt:M1C005
HAMAP:MF_00145	PFAM:PF00162	EnsemblPlantsGene:PGSC0003DMG400022119	PGSC:PGSC0003DMG400022119	EnsemblPlants:PGSC0003DMT400056871	PIRSF:PIRSF000724
PRINTS:PR00477	ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniParc:UPI00029595A4	:	:

Description

Phosphoglycerate kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022119]

Coordinates

chr7:-:56624493..56627033

Molecular Weight (calculated)

42332.5 Da

IEP (calculated)

5.358

GRAVY (calculated)

0.103

Length

401 amino acids

Sequence
(BLAST)

001: MAVKKSVGSL KEADLKGKRV FVRVDLNVPL DDNFNITDDT RIRAAVPTIK YLMQNGARVI LASHLGRPKG VTPKYSLKPL VPRLSELLGI EVKMANDSIG
101: PEVENLVAEL PEGGVVLLEN VRFYKEEEKN DPEFAKKLAS LADLYVNDAF GTAHRAHAST EGVAKVLKPA VAGFLMQKEL DYLVGAVSNP QKPFAAIVGG
201: SKVSSKIGVI ESLLEKVDVL LLGGGMIFTF YKAQGYAVGS SLVEEDKLDL ATSLMEKAKT KGVSLLLPTD VVIADKFAAD ANSKIVPASE IPDGWMGLDI
301: GPDAIKSFGS ALDTTKTIIW NGPMGVFEFD KFAAGTEAIA KKLAELSGKG VTTIIGGGDS VAAVEKVGLA EKMSHISTGG GASLELLEGK PLPGVLALDD
401: A

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.