Factsheet for PGSC0003DMT400056870

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g066610.2.1	Tomato	plastid	98.13	98.13
Bra034731.1-P	Field mustard	cytosol	20.12	91.51
HORVU1Hr1G067300.1	Barley	plastid	74.69	88.24
Zm00001d010672_P001	Maize	cytosol	32.99	87.85
PGSC0003DMT400056871	Potato	cytosol	71.16	85.54
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	82.99	83.68
KRH13755	Soybean	endoplasmic reticulum, nucleus	82.99	82.82
KRH43699	Soybean	endoplasmic reticulum, nucleus	83.19	82.68
AT1G56190.1	Thale cress	plastid	81.95	82.64
AT3G12780.1	Thale cress	plastid	82.16	82.33
CDY43401	Canola	plastid	81.95	82.29
Bra039342.1-P	Field mustard	plastid	81.95	82.29
GSMUA_Achr6P00200_001	Banana	plastid	81.74	82.08
CDY24247	Canola	plastid	81.54	81.7
GSMUA_Achr4P33150_001	Banana	plasma membrane	80.91	81.42
CDX73803	Canola	plastid	81.74	81.41
CDY00798	Canola	plastid	81.33	81.33
Bra001470.1-P	Field mustard	plastid	81.54	81.2
Os05t0496200-01	Rice	extracellular, plastid	80.08	79.75
TraesCS1A01G313300.1	Wheat	plastid	78.42	79.08
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	78.22	78.87
Zm00001d038579_P001	Maize	plastid	77.8	78.12
Bra034729.1-P	Field mustard	plastid	60.79	77.93
EES19743	Sorghum	plastid	77.8	77.64
Zm00001d043194_P001	Maize	plastid	54.77	70.97
TraesCS1B01G325100.1	Wheat	golgi	78.42	66.55
Os01t0800266-00	Rice	extracellular	38.59	58.86
CDY52872	Canola	cytosol	74.07	44.79
PGSC0003DMT400009906	Potato	cytosol, mitochondrion	23.65	24.95

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
ProteinID:AAC26785	ProteinID:AAC26785.1	ProteinID:ABB72817	ProteinID:ABB72817.1	ProteinID:ABB86255	ProteinID:ABB86255.1
EMBL:AF073473	EMBL:DQ268858	EMBL:DQ284467	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR015824	UniProt:M1C004	HAMAP:MF_00145
PFAM:PF00162	EnsemblPlantsGene:PGSC0003DMG400022118	PGSC:PGSC0003DMG400022118	EnsemblPlants:PGSC0003DMT400056870	PIRSF:PIRSF000724	PRINTS:PR00477
ScanProsite:PS00111	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N
InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniParc:UPI000294C5F1	SEG:seg	:	:

Description

Phosphoglycerate kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022118]

Coordinates

chr7:-:56628092..56630449

Molecular Weight (calculated)

50457.0 Da

IEP (calculated)

8.091

GRAVY (calculated)

0.135

Length

482 amino acids

Sequence
(BLAST)

001: MASATASHTF CGIPTTSSSS TTNRSTTHSS ARFLLKTPLR RLGFAGAVAD PLFTNHVATK LRSLKASSNP VRAVVSMAKK SVGDLSSSDL KGKKVFVRAD
101: LNVPLDDAQN ITDDTRIRAA IPTIKHLIAN GAKVILSTHL GRPKGVTPKY SLAPLVPRLS ELLGIQVVKA DDCIGPEVEK LVDSLPEGGV LLLENVRFYK
201: EEEKNEPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSTPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATSLL EKAKAKGVSL LLPSDVVIAD KFAPDANSKI VPASAIPDGW MGLDIGPDSI KTFNDALDTT KTVIWNGPMG
401: VFEFDKFAAG TEAIAKKLAD LSGKGVTTII GGGDSVAAVE KVGVASVMSH ISTGGGASLE LLEGKVLPGV IALDEADAPV AV

Best Arabidopsis Sequence Match ( AT1G56190.1 )
(BLAST)

001: MASTAATAAL SIIKSTGGAA VTRSSRASFG HIPSTSVSAR RLGFSAVVDS RFSVHVASKV HSVRGKGARG VITMAKKSVG DLNSVDLKGK KVFVRADLNV
101: PLDDNQNITD DTRIRAAIPT IKFLIENGAK VILSTHLGRP KGVTPKFSLA PLVPRLSELL GIEVVKADDC IGPEVETLVA SLPEGGVLLL ENVRFYKEEE
201: KNEPDFAKKL ASLADLYVND AFGTAHRAHA STEGVTKFLK PSVAGFLLQK ELDYLVGAVS NPKRPFAAIV GGSKVSSKIG VIESLLEKCD ILLLGGGMIF
301: TFYKAQGLSV GSSLVEEDKL ELATTLLAKA KARGVSLLLP TDVVIADKFA PDANSKIVPA SAIPDGWMGL DIGPDSVKTF NEALDTTQTV IWNGPMGVFE
401: FEKFAKGTEA VANKLAELSK KGVTTIIGGG DSVAAVEKVG VAGVMSHIST GGGASLELLE GKVLPGVVAL DEATPVTV

Arabidopsis Description

Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178W4Q1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.