CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43401	Canola	plastid	98.54	98.75
CDY00798	Canola	plastid	93.35	93.15
CDX73803	Canola	plastid	93.56	92.98
AT3G12780.1	Thale cress	plastid	92.93	92.93
HORVU1Hr1G067300.1	Barley	plastid	75.05	88.48
Zm00001d010672_P001	Maize	cytosol	32.43	86.19
CDX87375	Canola	cytosol	69.02	82.79
CDY70232	Canola	cytosol	69.02	82.79
VIT_19s0085g00380.t01	Wine grape	extracellular, plastid	81.5	82.01
CDX88547	Canola	cytosol	59.88	81.82
PGSC0003DMT400056870	Potato	cytosol, extracellular, plastid	81.7	81.54
CDX67989	Canola	cytosol	58.84	81.32
KRH43699	Soybean	endoplasmic reticulum, nucleus	81.5	80.82
KRH13755	Soybean	endoplasmic reticulum, nucleus	81.08	80.75
Solyc07g066610.2.1	Tomato	plastid	80.67	80.5
GSMUA_Achr4P33150_001	Banana	plasma membrane	80.04	80.38
CDX79326	Canola	cytosol	58.84	80.17
TraesCS1A01G313300.1	Wheat	plastid	78.79	79.29
TraesCS1D01G313800.2	Wheat	golgi, plastid, unclear	78.79	79.29
GSMUA_Achr6P00200_001	Banana	plastid	79.0	79.17
Zm00001d038579_P001	Maize	plastid	78.79	78.96
Os05t0496200-01	Rice	extracellular, plastid	79.21	78.72
EES19743	Sorghum	plastid	78.79	78.47
CDY49746	Canola	plastid	60.08	74.48
Zm00001d043194_P001	Maize	plastid	54.68	70.7
TraesCS1B01G325100.1	Wheat	golgi	78.79	66.73
CDX79325	Canola	cytosol	43.24	62.28
Os01t0800266-00	Rice	extracellular	38.88	59.18
CDY52872	Canola	cytosol	82.54	49.81

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:1.2.2	MapMan:2.1.1.5	MapMan:3.12.5	Gene3D:3.40.50.1260
GO:A0A078GGF9	UniProt:A0A078GGF9	EnsemblPlants:CDY24247	ProteinID:CDY24247	ProteinID:CDY24247.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00026383001
InterPro:IPR015824	HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	ScanProsite:PS00111
PANTHER:PTHR11406	PANTHER:PTHR11406:SF11	MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901
MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase	InterPro:Phosphoglycerate_kinase_CS	InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748
UniPathway:UPA00109	UniParc:UPI0004EBBB57	SEG:seg	:	:	:

Description

BnaC01g38270DPhosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078GGF9]

Coordinates

chrLK032155:+:603875..606356

Molecular Weight (calculated)

50137.7 Da

IEP (calculated)

7.068

GRAVY (calculated)

0.191

Length

481 amino acids

Sequence
(BLAST)

001: MASVAASPAF SLLKSTTGAT ASSAATRARA SLLPVPTKSI STRPLGFSAV LDSRFTVHVA SKVQSFRGKG TRGVVSMAKK SVGDLTSADL KGKKVFVRAD
101: LNVPLDDNQT ITDDTRIRAA IPTIKYLIEN GAKVILSTHL GRPKGVTPKF SLAPLVPRLS ELLGIEVKKA DDCIGPEVES LVASLPEGGV LLLENVRFYK
201: EEEKNDPDFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSSPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATSLL AKAKAKGVSL LLPTDVVVAD KFAPDANSKV VSASGIEDGW MGLDIGPDSI KTFNEALDTT QTVIWNGPMG
401: VFEMEKFAAG TEAIANKLAE LSEKGVTTII GGGDSVAAVE KVGVAGVMSH ISTGGGASLE LLEGKVLPGV IALDEAIAVT V

Best Arabidopsis Sequence Match ( AT3G12780.1 )
(BLAST)

001: MASAAASSAF SLLKSTGAVA SSAGTRARAS LLPIPSTSVS ARPLGFSATL DSRRFSLHVA SKVESVRGKG SRGVVSMAKK SVGDLTSADL KGKKVFVRAD
101: LNVPLDDNQT ITDDTRIRAA IPTIKYLIEN GAKVILSTHL GRPKGVTPKF SLAPLVPRLS ELLGIEVTKA DDCIGPEVES LVASLPEGGV LLLENVRFYK
201: EEEKNDPEFA KKLASLADLY VNDAFGTAHR AHASTEGVTK FLKPSVAGFL LQKELDYLVG AVSNPKRPFA AIVGGSKVSS KIGVIESLLE KCDILLLGGG
301: MIFTFYKAQG LSVGSSLVEE DKLELATELL AKAKAKGVSL LLPTDVVVAD KFAPDANSKI VPASGIEDGW MGLDIGPDSI KTFNEALDTT QTVIWNGPMG
401: VFEMEKFAAG TEAIANKLAE LSEKGVTTII GGGDSVAAVE KVGVAGVMSH ISTGGGASLE LLEGKVLPGV IALDEAIPVT V

Arabidopsis Description

PGK1Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178V5M8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.