CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035124.1-P	Field mustard	cytosol	99.25	99.25
CDX88547	Canola	cytosol	87.03	99.15
CDY70232	Canola	cytosol	98.25	98.25
AT1G79550.2	Thale cress	cytosol	98.0	98.0
CDX67989	Canola	cytosol	84.04	96.84
CDX79326	Canola	cytosol	84.29	95.75
PGSC0003DMT400056871	Potato	cytosol	89.53	89.53
CDY49746	Canola	plastid	86.28	89.18
Solyc07g066600.2.1	Tomato	nucleus, plastid	89.03	89.03
KRH43698	Soybean	endoplasmic reticulum, nucleus	89.03	89.03
VIT_19s0085g00370.t01	Wine grape	cytosol	88.03	88.03
CDX79325	Canola	cytosol	61.35	73.65
CDY00798	Canola	plastid	83.54	69.5
CDY43401	Canola	plastid	83.04	69.38
CDX73803	Canola	plastid	83.54	69.21
CDY24247	Canola	plastid	82.79	69.02
TraesCS1B01G104200.1	Wheat	mitochondrion, peroxisome	23.19	66.91
CDY52872	Canola	cytosol	75.06	37.77

Protein Annotations

KEGG:00010+2.7.2.3	KEGG:00710+2.7.2.3	MapMan:2.1.1.5	Gene3D:3.40.50.1260	GO:A0A078DDS4	EnsemblPlants:CDX87375
ProteinID:CDX87375	ProteinID:CDX87375.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004618	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00146344001	InterPro:IPR015824
HAMAP:MF_00145	PFAM:PF00162	PIRSF:PIRSF000724	PRINTS:PR00477	PANTHER:PTHR11406	PANTHER:PTHR11406:SF11
MetaCyc:PWY-1042	MetaCyc:PWY-5484	MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	InterPro:Phosphoglycerate_kinase
InterPro:Phosphoglycerate_kinase_N	InterPro:Phosphoglycerate_kinase_sf	SUPFAM:SSF53748	UniPathway:UPA00109	UniParc:UPI0004EF2EE3	:

Description

BnaA07g34980D

Coordinates

chrLK031850:+:331375..333803

Molecular Weight (calculated)

42134.2 Da

IEP (calculated)

5.787

GRAVY (calculated)

0.118

Length

401 amino acids

Sequence
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKFSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKYLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLSTVDIL LLGGGMIFTF YKAQGHSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVAATA IPDGWMGLDI
301: GPDSIKTFSD ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDD
401: A

Best Arabidopsis Sequence Match ( AT1G79550.1 )
(BLAST)

001: MATKRSVGTL KEADLKGKSV FVRVDLNVPL DDNSNITDDT RIRAAVPTIK YLMGNGSRVV LCSHLGRPKG VTPKYSLKPL VPRLSELLGV EVVMANDSIG
101: EEVQKLVAGL PEGGVLLLEN VRFYAEEEKN DPEFAKKLAA LADVYVNDAF GTAHRAHAST EGVAKFLKPS VAGFLMQKEL DYLVGAVANP KKPFAAIVGG
201: SKVSTKIGVI ESLLNTVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL AKSLMEKAKA KGVSLLLPTD VVIADKFAPD ANSKIVPATA IPDGWMGLDI
301: GPDSIKTFSE ALDTTKTIIW NGPMGVFEFD KFAAGTEAVA KQLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK PLPGVLALDE
401: A

Arabidopsis Description

PGK3Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WHC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.