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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029768_P001 Maize plasma membrane 94.06 95.22
Os10t0541000-01 Rice golgi 75.87 80.82
TraesCS1B01G216300.1 Wheat plasma membrane 77.62 79.29
TraesCS1A01G202000.1 Wheat plasma membrane 77.62 79.29
TraesCS1D01G205500.1 Wheat plasma membrane 77.62 79.0
HORVU1Hr1G052110.8 Barley golgi, nucleus, plasma membrane 77.27 78.51
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, plasma membrane 44.76 62.59
AT1G42560.1 Thale cress plasma membrane 46.68 58.04
CDY23718 Canola plasma membrane 43.18 56.14
Bra021867.1-P Field mustard plasma membrane 43.01 55.91
CDY37702 Canola plasma membrane 43.01 55.91
VIT_18s0122g00910.t01 Wine grape plasma membrane 51.05 55.3
GSMUA_Achr1P02860_001 Banana plasma membrane 36.71 55.26
AT2G33670.1 Thale cress cytoskeleton, golgi, plasma membrane 47.38 54.09
Solyc02g082430.2.1 Tomato plasma membrane 51.92 53.71
PGSC0003DMT400059600 Potato plasma membrane 51.57 53.64
GSMUA_Achr11P... Banana plasma membrane 52.1 53.41
PGSC0003DMT400035548 Potato plasma membrane 51.22 53.08
Solyc08g067760.2.1 Tomato plasma membrane 49.3 53.01
PGSC0003DMT400083841 Potato plasma membrane 48.95 52.63
VIT_07s0031g02240.t01 Wine grape golgi, nucleus, plasma membrane 51.05 51.87
KRH51571 Soybean plasma membrane 47.55 51.61
KRH60889 Soybean plasma membrane 47.03 51.34
OQU77171 Sorghum cytosol, golgi, plasma membrane 46.15 51.26
KRH07806 Soybean plasma membrane 50.87 50.52
KRH39404 Soybean plasma membrane 50.52 50.09
AT2G17430.1 Thale cress golgi 46.68 49.26
CDY30365 Canola plasma membrane 45.98 48.7
KRH76519 Soybean golgi 50.87 48.66
Bra037272.1-P Field mustard golgi, plasma membrane 45.63 48.51
AT5G65970.1 Thale cress plasma membrane 48.08 48.33
CDY26808 Canola golgi, plasma membrane 45.45 48.15
Bra002063.1-P Field mustard plasma membrane 49.13 47.23
Bra037270.1-P Field mustard plasma membrane 48.78 47.13
CDY30363 Canola plasma membrane 48.78 47.13
CDY20802 Canola plasma membrane 48.95 47.06
CDY24339 Canola plasma membrane 48.95 47.06
AT2G17480.1 Thale cress plasma membrane 48.78 47.05
KRH28943 Soybean plasma membrane 48.95 46.67
KRH72065 Soybean plasma membrane 24.48 46.51
CDY26810 Canola plasma membrane 48.6 46.26
EER92932 Sorghum golgi, plasma membrane 44.23 44.94
EES19537 Sorghum plasma membrane 36.36 43.42
KXG33848 Sorghum plasma membrane 37.94 42.3
OQU78020 Sorghum plasma membrane 35.66 41.13
EES06995 Sorghum cytosol, golgi, plasma membrane 33.92 36.4
KXG34783 Sorghum plasma membrane 30.59 36.23
OQU78019 Sorghum plasma membrane 34.62 36.13
KXG20348 Sorghum plasma membrane 31.29 35.45
EES12236 Sorghum plasma membrane 30.94 35.12
EES08096 Sorghum cytosol, endoplasmic reticulum, plasma membrane 29.9 34.0
OQU82585 Sorghum plasma membrane 31.82 30.08
Protein Annotations
MapMan:35.1EntrezGene:8062857UniProt:C5WTK9EnsemblPlants:EER92006ProteinID:EER92006ProteinID:EER92006.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0009607GO:GO:0016020
GO:GO:0016021InterPro:MloPFAM:PF03094PANTHER:PTHR31942PANTHER:PTHR31942:SF25EnsemblPlantsGene:SORBI_3001G312600
unigene:Sbi.17026TMHMM:TMhelixUniParc:UPI0001A825AARefSeq:XP_002465008.1SEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:59965707..59970759
Molecular Weight (calculated)
65054.5 Da
IEP (calculated)
9.287
GRAVY (calculated)
-0.088
Length
572 amino acids
Sequence
(BLAST)
001: MGGDGDGTRA LDQTPTWAVA AVCAVIVAAS ILLEGLLHHL GQLLNKKRKI ALFDALEKVK SELMTLGFIS LLLTVTGRYI AHICIPEGAA NTMLPCRRQS
101: GHSEAEEPED HGRRHLSEDP TNLFSCPKGM VSLVSADGMH QLHIFVFFLA VFHVTFSFFT MSLGRAKTRI WKVWEKETCS PEYNYLNDPS KFRLTHQTSF
201: VRQHASCWSK STITLYFVSF FRQFFRSVRR TDYLTLRHGF ISAHLSPGTR FNFRKYIKRS LEDDFKTVVG ISPPLWASAL AVMLFNVHGW HNLFWFSTIP
301: LVVILAVGTK LQAIIAMMAI EITERHTVIQ GMPVVKLSDD HFWFGKPRLV LHLIHFASFQ NAFEITYFFW IWYEFGLRSC FHDNFELIIA RVCLGAIVQF
401: MCSYITLPLY ALVSQMGSQM KRTIFDEQTA KALKKWHKAV VKKKHHNKGS SHDSSETPST DTATPAREAG EWQRLHDVPV RHLHRYKTIA HVGGARSPLS
501: DSDYSDTDDT EPLSSSQTRH LIPPAKQRSL DTERAEVRVD VVETVAAVAP RDVLQDSFSF PRLLPPRHVP DK
Best Arabidopsis Sequence Match ( AT1G42560.1 )
(BLAST)
001: MAGGGGGGGG EGPRQLDQTP TWAVSTVCGV IILISIILEL IIHKVGEVFE RKKKKALFEA LEKIKNELMV LGFISLLLTF GQNYIASICV PSRYGHAMSF
101: CGPYDGPSED DRKKLKKTDH AMRILYSVQR RSLADAPPVN CKKDYVALIS LNALHQVHIF IFFLAVFHVI YSAITMMLGR AKIRGWKVWE QEVIHEQEMM
201: NDPSRFRLTH ETSFVREHVN SWASNKFFFY VMCFFRQILR SVRKSDYLTM RHGFISVHLA PGMKFDFQKY IKRSLEDDFK VVVGIRPELW AFVMLFLLFD
301: VHGWYVTAVI TMIPPLLTLA IGTKLQAIIS YMALEIQERH AVIQGMPVVN VSDQHFWFEK PDLVLHMIHF VLFQNAFEIT YFFWIWYEFG LRSCFHHHFG
401: LIIIRVCLGV GVQFLCSYIT LPLYALVTQM GSTMKRSVFD EQTSKALEQW HKKARKKNEK
Arabidopsis Description
MLO9MLO-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.