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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 7
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038199_P001 Maize plasma membrane 90.81 89.14
OQU78020 Sorghum plasma membrane 70.15 67.74
TraesCS1D01G261400.1 Wheat plasma membrane 70.56 67.74
TraesCS1A01G261400.1 Wheat plasma membrane 70.35 67.54
TraesCS3D01G005300.1 Wheat plasma membrane 61.59 66.44
KXG33848 Sorghum plasma membrane 66.81 62.38
TraesCS1B01G272200.2 Wheat plasma membrane, plastid 65.34 61.13
PGSC0003DMT400052279 Potato cytosol, golgi, plasma membrane 60.33 60.59
GSMUA_Achr7P23630_001 Banana plasma membrane 63.67 60.04
HORVU1Hr1G064440.6 Barley plastid 64.93 59.92
KRH51360 Soybean cytosol, golgi, plasma membrane 59.29 58.2
KRH60671 Soybean cytosol, golgi, plasma membrane 60.54 57.31
VIT_00s0227g00140.t01 Wine grape cytosol, golgi, plasma membrane 57.41 57.05
OQU78019 Sorghum plasma membrane 64.51 56.39
CDX91294 Canola cytosol, golgi, plasma membrane 59.5 56.32
GSMUA_Achr5P01450_001 Banana plasma membrane 56.58 56.11
TraesCS3A01G005500.1 Wheat plasma membrane 63.05 55.93
Solyc08g015870.2.1 Tomato cytosol, golgi, plasma membrane 58.04 55.16
Bra018538.1-P Field mustard cytosol, golgi, plasma membrane 59.29 55.04
Bra036255.1-P Field mustard cytosol, plasma membrane, vacuole 60.54 54.82
Solyc09g018830.2.1 Tomato cytosol, golgi, peroxisome 30.9 54.81
AT4G02600.1 Thale cress plasma membrane 60.13 54.75
CDY21899 Canola cytosol, plasma membrane, vacuole 60.33 54.63
PGSC0003DMT400071137 Potato cytosol, golgi, plasma membrane 56.99 53.85
KRH07301 Soybean plasma membrane 58.25 53.76
Solyc06g082820.2.1 Tomato cytosol, golgi, plasma membrane 56.99 53.42
KRH66249 Soybean cytosol, golgi, plasma membrane 57.62 53.38
VIT_05s0094g01570.t01 Wine grape cytosol, golgi, plasma membrane 56.16 53.16
GSMUA_Achr5P01440_001 Banana plastid 40.5 53.15
CDY22065 Canola plasma membrane 51.77 53.1
CDX97279 Canola plasma membrane 51.77 52.88
PGSC0003DMT400035670 Potato cytosol, golgi, plasma membrane 56.58 52.42
GSMUA_Achr5P01430_001 Banana cytoskeleton, cytosol, peroxisome 29.02 50.92
AT2G44110.2 Thale cress plasma membrane 51.15 49.3
CDY23418 Canola plasma membrane 50.1 46.97
KXG34783 Sorghum plasma membrane 46.35 45.96
EES12236 Sorghum plasma membrane 47.81 45.44
EES06995 Sorghum cytosol, golgi, plasma membrane 50.1 45.03
KXG20348 Sorghum plasma membrane 45.72 43.37
OQU77171 Sorghum cytosol, golgi, plasma membrane 41.75 38.84
EER92006 Sorghum plasma membrane 43.42 36.36
EER92932 Sorghum golgi, plasma membrane 42.17 35.88
CDY30455 Canola plasma membrane 50.31 35.86
Bra037666.1-P Field mustard plasma membrane 50.31 35.86
EES08096 Sorghum cytosol, endoplasmic reticulum, plasma membrane 35.28 33.6
OQU82585 Sorghum plasma membrane 42.17 33.39
Protein Annotations
MapMan:35.1EntrezGene:8076967UniProt:C5YY47EnsemblPlants:EES19537ProteinID:EES19537ProteinID:EES19537.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0009607GO:GO:0016020
GO:GO:0016021InterPro:MloPFAM:PF03094PANTHER:PTHR31942PANTHER:PTHR31942:SF24EnsemblPlantsGene:SORBI_3009G140000
unigene:Sbi.11149TMHMM:TMhelixUniParc:UPI0001A893AFRefSeq:XP_002441107.1SEG:seg:
Description
hypothetical protein
Coordinates
chr9:-:49690545..49694170
Molecular Weight (calculated)
53975.4 Da
IEP (calculated)
8.184
GRAVY (calculated)
0.245
Length
479 amino acids
Sequence
(BLAST)
001: MAEADEGAAL QFTPTWIVAA VCTILVLISL AAERGLHHLG KTLKKNHQRP LYEALLKVKE ELMLLGFISL LLTVLQGTIQ RTCIPPSWTN YMLPCQRPGQ
101: GHDEAPAAAA MAARLVAADI LGGISRARML SEAGAEAGLC EMEGKVPLLS QEALHQLHIF IFVLAVSHVF FCATTMLLGG AKIHKWKKWE EEIQKNAAGN
201: GSKKVLPMHQ VSFIREHYEV IGTDSKTLCW LHSFRKQFYG SVAKSDYAAM RLGFIMTHCR GNPKFDFHKY MMRVLESDFK KIVGTSWRLW IFVVIFLLLN
301: VNGWHTYFWM AFLPLVLLLA VGTKLEHVIA QLAYDVAEKQ TATIEGDLVV TPSDQHFWFG RPRIILHLIH FILFQNAFEL AFFFWILMTY GFESCFMDNI
401: GFLVPRLVLG VVIQLLCSYS TLPLYAIVTQ MGSYYKMEIF NEHVQHGVLG WAEKAKKRSG FKEGSSSPTA ESMHGEDAA
Best Arabidopsis Sequence Match ( AT4G02600.1 )
(BLAST)
001: MGHGGEGMSL EFTPTWVVAG VCTVIVAISL AVERLLHYFG TVLKKKKQKP LYEALQKVKE ELMLLGFISL LLTVFQGLIS KFCVKENVLM HMLPCSLDSR
101: REAGASEHKN VTAKEHFQTF LPIVGTTRRL LAEHAAVQVG YCSEKGKVPL LSLEALHHLH IFIFVLAISH VTFCVLTVIF GSTRIHQWKK WEDSIADEKF
201: DPETALRKRR VTHVHNHAFI KEHFLGIGKD SVILGWTQSF LKQFYDSVTK SDYVTLRLGF IMTHCKGNPK LNFHKYMMRA LEDDFKQVVG ISWYLWIFVV
301: IFLLLNVNGW HTYFWIAFIP FALLLAVGTK LEHVIAQLAH EVAEKHVAIE GDLVVKPSDE HFWFSKPQIV LYLIHFILFQ NAFEIAFFFW IWVTYGFDSC
401: IMGQVRYIVP RLVIGVFIQV LCSYSTLPLY AIVSQMGSSF KKAIFEENVQ VGLVGWAQKV KQKRDLKAAA SNGDEGSSQA GPGPDSGSGS APAAGPGAGF
501: AGIQLSRVTR NNAGDTNNEI TPDHNN
Arabidopsis Description
MLO1MLO-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O49621]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.