Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047269_P001 | Maize | cytosol | 83.46 | 89.83 |
| Os03t0410300-01 | Rice | cytosol | 68.5 | 76.32 |
| EES08878 | Sorghum | cytosol | 53.54 | 55.74 |
| KXG35568 | Sorghum | mitochondrion | 38.58 | 23.67 |
Protein Annotations
| EMBL:EU916974 | EnsemblPlants:EER92142 | EnsemblPlantsGene:SORBI_3001G340700 | EntrezGene:8080417 | GO:GO:0008150 | GO:GO:0042753 |
| InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF2 | PFAM:PF07011 | ProteinID:EER92142 | ProteinID:EER92142.1 |
| RefSeq:XP_002465144.1 | SEG:seg | unigene:Sbi.8413 | UniParc:UPI0001A82162 | UniProt:C5WWN3 | MapMan:27.1.6.3.3 |
Description
hypothetical protein
Coordinates
chr1:+:62805258..62807273
Molecular Weight (calculated)
13170.5 Da
IEP (calculated)
6.804
GRAVY (calculated)
-0.250
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGEATLSG FVGGGGGAGG SPGVDTKVLH AFQTSFVQVQ TLLDQNRLLI NEINQNHESK VPGDLSRNVG LIRELNNNIR RVVDLYADLS SLFAASDAGR
101: AASEGGSVGT VRQAPGAGHK RIRSGLD
101: AASEGGSVGT VRQAPGAGHK RIRSGLD
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.