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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • cytosol 1
  • nucleus 2
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P27990_001 Banana cytosol 70.39 71.33
GSMUA_Achr10P... Banana cytosol 60.53 59.74
GSMUA_Achr5P29590_001 Banana cytosol 45.39 56.56
GSMUA_Achr11P... Banana cytosol 50.66 53.1
Protein Annotations
EnsemblPlants:GSMUA_Achr6P32600_001EnsemblPlants:GSMUA_Achr6T32600_001EnsemblPlantsGene:GSMUA_Achr6G32600_001Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR036638ncoils:CoilPANTHER:PTHR31945
PANTHER:PTHR31945:SF43SUPFAM:SSF47459UniParc:UPI0002961ABAUniProt:M0TC54MapMan:15.5.32:
Description
Putative Transcription factor SCREAM2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G32600_001]
Coordinates
chr6:-:31940256..31941745
Molecular Weight (calculated)
16555.9 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.000
Length
152 amino acids
Sequence
(BLAST)
001: MVSREHNRAA LHEKLQVLRS LTNSHALRKS SIILDASKYI KELKQKIQRL NQEIESAHST VHDNPLPSVT VETLKKGFLI NVFSEKSCPG LLVAVLEAIE
101: SLGLSVVEAK ASCTNAFLLE LFGREGESVD AQVVKAAVLH AVESFHGSSE AA
Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)
001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN
Arabidopsis Description
Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.