Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 78.69 | 66.21 |
| VIT_08s0058g00960.t01 | Wine grape | mitochondrion | 64.75 | 50.64 |
| GSMUA_Achr5P27990_001 | Banana | cytosol | 61.48 | 50.0 |
| KRH40793 | Soybean | cytosol | 61.48 | 49.34 |
| KRH00396 | Soybean | nucleus | 59.84 | 48.03 |
| KRH65496 | Soybean | mitochondrion | 59.02 | 48.0 |
| KRH76078 | Soybean | mitochondrion | 59.02 | 48.0 |
| GSMUA_Achr10P... | Banana | cytosol | 58.2 | 46.1 |
| GSMUA_Achr6P32600_001 | Banana | mitochondrion | 56.56 | 45.39 |
| Solyc09g018500.1.1 | Tomato | cytosol | 59.02 | 40.68 |
| PGSC0003DMT400068342 | Potato | cytosol, nucleus, peroxisome | 58.2 | 40.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P29590_001 | EnsemblPlants:GSMUA_Achr5T29590_001 | EnsemblPlantsGene:GSMUA_Achr5G29590_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | ncoils:Coil | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF43 | UniParc:UPI000296AD18 | UniProt:M0T2T3 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative Transcription factor SCREAM2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G29590_001]
Coordinates
chr5:-:29234442..29235720
Molecular Weight (calculated)
13445.3 Da
IEP (calculated)
4.542
GRAVY (calculated)
0.036
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSREQKKGV LHERLQLLRS VTNSSAPSKA SIIVDALKYI EELKQNIEAC KRDLAEESCL PMVTVETLEK GFLINVFCDK NCPGLLVSVL EAFEALGLEV
101: LDASISCTDS FRLEAVGGEE LR
101: LDASISCTDS FRLEAVGGEE LR
001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLERQH L
101: FEDIGLNVLE ARASCTDSFS LHAMGLERQH L
Arabidopsis Description
Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.