Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40793 | Soybean | cytosol | 82.89 | 82.89 |
| KRH76078 | Soybean | mitochondrion | 69.08 | 70.0 |
| KRH65496 | Soybean | mitochondrion | 68.42 | 69.33 |
| VIT_08s0058g00960.t01 | Wine grape | mitochondrion | 63.16 | 61.54 |
| GSMUA_Achr11P... | Banana | cytosol | 57.89 | 60.69 |
| GSMUA_Achr5P29590_001 | Banana | cytosol | 48.03 | 59.84 |
| KRH73223 | Soybean | cytosol | 59.21 | 57.69 |
| KRH14875 | Soybean | cytosol | 58.55 | 57.05 |
| KRH31215 | Soybean | cytosol | 57.89 | 56.05 |
| KRG97660 | Soybean | cytosol | 57.24 | 55.41 |
| Os05t0337200-01 | Rice | cytosol, mitochondrion | 50.66 | 50.33 |
| Os07t0676600-01 | Rice | cytosol | 51.32 | 49.68 |
| HORVU4Hr1G049550.2 | Barley | mitochondrion | 50.0 | 47.8 |
| TraesCS4A01G136800.2 | Wheat | mitochondrion | 50.0 | 47.5 |
| TraesCS4B01G167700.1 | Wheat | mitochondrion | 49.34 | 47.17 |
| TraesCS4D01G170400.1 | Wheat | cytosol, mitochondrion | 49.34 | 46.88 |
| Os03t0338400-01 | Rice | nucleus | 50.0 | 46.63 |
| EER92303 | Sorghum | mitochondrion | 50.0 | 46.34 |
| KXG36938 | Sorghum | cytosol | 50.66 | 45.03 |
| TraesCS2D01G108900.1 | Wheat | mitochondrion | 46.05 | 44.87 |
| TraesCS2B01G126400.1 | Wheat | mitochondrion | 46.05 | 44.59 |
| Zm00001d029078_P002 | Maize | mitochondrion | 48.03 | 44.51 |
| Zm00001d047512_P002 | Maize | cytosol, mitochondrion | 48.68 | 43.79 |
| KRH17139 | Soybean | mitochondrion | 44.08 | 42.14 |
| KRH30146 | Soybean | mitochondrion | 43.42 | 41.51 |
| KRH72775 | Soybean | mitochondrion | 42.11 | 40.51 |
| Solyc09g018500.1.1 | Tomato | cytosol | 46.05 | 39.55 |
| Zm00001d000400_P001 | Maize | nucleus | 43.42 | 39.29 |
| PGSC0003DMT400068342 | Potato | cytosol, nucleus, peroxisome | 45.39 | 39.2 |
| TraesCS2A01G108800.1 | Wheat | mitochondrion | 40.79 | 38.27 |
| OQU77760 | Sorghum | mitochondrion | 46.71 | 34.98 |
| KRG98184 | Soybean | extracellular, plastid | 38.82 | 34.1 |
| HORVU2Hr1G018600.1 | Barley | mitochondrion | 46.05 | 32.11 |
Protein Annotations
| EMBL:ACUP02011440 | EnsemblPlants:KRH00396 | EnsemblPlantsGene:GLYMA_18G210700 | EntrezGene:100782382 | Gene3D:4.10.280.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:ACT_dom | InterPro:HLH_DNA-bd_sf | InterPro:IPR002912 |
| InterPro:IPR036638 | ncoils:Coil | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF8 | PFscan:PS51671 | ProteinID:KRH00396 |
| ProteinID:KRH00396.1 | SUPFAM:SSF47459 | UniParc:UPI000233E846 | UniProt:K7MTR4 | MapMan:15.5.32 | : |
Description
hypothetical protein
Coordinates
chr18:+:49719744..49721525
Molecular Weight (calculated)
16766.1 Da
IEP (calculated)
4.629
GRAVY (calculated)
-0.207
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSREKKR ESLEDTLQQL RDVTNSSALN KASIIVDASK YIEKLKQKVE GLNSELGIAD SSTSQIDELP MVVVKTLKKG FLINVLLEKN FPGMLVSILE
101: TFEELGLDVL DARVSCEDSF QLEAVGRESH KNDSVDAQVV KQAVLQAIKN VD
101: TFEELGLDVL DARVSCEDSF QLEAVGRESH KNDSVDAQVV KQAVLQAIKN VD
001: MVSREHKRGS SLREKFHLLR SITDSHAESE TSIIVDASKY IKKLKQKVEK INNATTSEQS FRESSDPNPM VTVETLEKGF MIKVMSRKNE AGMLVCVLET
101: FEDLGLDVVE ARVSCTDTFS LHAIGSSNND DGDCIDAEAV KQAVAEAIRT WSDSHA
101: FEDLGLDVVE ARVSCTDTFS LHAIGSSNND DGDCIDAEAV KQAVAEAIRT WSDSHA
Arabidopsis Description
At3g56220 [Source:UniProtKB/TrEMBL;Acc:Q9LYM0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.