CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029078_P002	Maize	mitochondrion	94.51	94.51
Zm00001d047512_P002	Maize	cytosol, mitochondrion	93.29	90.53
Os03t0338400-01	Rice	nucleus	77.44	77.91
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	75.0	76.88
TraesCS4A01G136800.2	Wheat	mitochondrion	75.0	76.88
TraesCS4B01G167700.1	Wheat	mitochondrion	73.78	76.1
HORVU4Hr1G049550.2	Barley	mitochondrion	73.17	75.47
KXG36938	Sorghum	cytosol	74.39	71.34
KRH73223	Soybean	cytosol	57.93	60.9
KRH14875	Soybean	cytosol	56.71	59.62
VIT_08s0058g00960.t01	Wine grape	mitochondrion	56.1	58.97
VIT_13s0067g02280.t01	Wine grape	cytosol	56.71	58.49
GSMUA_Achr10P...	Banana	cytosol	54.88	58.44
KRH31215	Soybean	cytosol	52.44	54.78
KRG97660	Soybean	cytosol	52.44	54.78
KRH65496	Soybean	mitochondrion	50.0	54.67
KRH76078	Soybean	mitochondrion	49.39	54.0
VIT_06s0004g07700.t01	Wine grape	mitochondrion	52.44	53.75
KRH40793	Soybean	cytosol	48.17	51.97
AT2G40435.1	Thale cress	mitochondrion, nucleus	50.0	51.9
Solyc06g050840.2.1	Tomato	cytosol	49.39	50.94
KRH00396	Soybean	nucleus	46.34	50.0
PGSC0003DMT400071914	Potato	cytosol	48.78	50.0
CDX79988	Canola	nucleus	46.95	48.73
Bra004568.1-P	Field mustard	nucleus	46.95	48.73
CDY23908	Canola	nucleus	46.95	48.43
CDX67638	Canola	cytosol	46.34	48.41
Bra003232.1-P	Field mustard	cytosol	46.34	48.41
CDY71264	Canola	cytosol	46.34	48.41
CDY32003	Canola	cytosol	46.34	48.41
CDY27232	Canola	cytosol	46.34	48.41
Bra007228.1-P	Field mustard	cytosol	46.34	48.41
CDY52931	Canola	cytosol, mitochondrion	41.46	48.23
AT3G56220.1	Thale cress	nucleus	45.73	48.08
CDY06993	Canola	nucleus	35.37	47.93
CDX72157	Canola	cytosol	44.51	46.5
CDY45386	Canola	cytosol	45.12	46.25
CDX76055	Canola	cytosol	42.07	44.52
KRH17139	Soybean	mitochondrion	42.68	44.03
Bra016997.1-P	Field mustard	cytosol	28.66	43.52
CDY43345	Canola	cytosol	36.59	43.48
Bra014704.1-P	Field mustard	cytosol	42.07	42.86
Bra017003.1-P	Field mustard	cytosol	32.93	42.52
KRH72775	Soybean	mitochondrion	40.85	42.41
OQU77760	Sorghum	mitochondrion	52.44	42.36
KRH30146	Soybean	mitochondrion	40.85	42.14
Solyc09g018500.1.1	Tomato	cytosol	40.85	37.85
KXG27598	Sorghum	cytosol	39.63	37.57
PGSC0003DMT400068342	Potato	cytosol, nucleus, peroxisome	40.24	37.5
CDX93181	Canola	cytosol	21.34	36.46
KRG98184	Soybean	extracellular, plastid	34.15	32.37

Protein Annotations

EnsemblPlants:EER92303	EnsemblPlantsGene:SORBI_3001G379100	EntrezGene:8082324	ncoils:Coil	PANTHER:PTHR31945	PANTHER:PTHR31945:SF43
ProteinID:EER92303	ProteinID:EER92303.1	RefSeq:XP_002465305.1	SEG:seg	UniParc:UPI0001A82A2A	UniProt:C5X0R6
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:66774291..66776207

Molecular Weight (calculated)

17796.1 Da

IEP (calculated)

5.273

GRAVY (calculated)

-0.150

Length

164 amino acids

Sequence
(BLAST)

001: MMSSRERKKQ AAALQEKLKI LRSITHSHAL SNTSIIMDAS AYIKELKQKV VRLNQEIACA QDALRHKSSS YPTVTVETLG VQGSFLVNVF SDKSCPGLLV
101: SVLEAFDELG LSVLQATASC ADSFRLEAVG GENVADNVDE HVVKQAVLQA VRNCSESGSE QDEE

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.