CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97660	Soybean	cytosol	90.45	90.45
KRH73223	Soybean	cytosol	78.34	78.85
KRH14875	Soybean	cytosol	77.07	77.56
VIT_13s0067g02280.t01	Wine grape	cytosol	71.34	70.44
Solyc06g050840.2.1	Tomato	cytosol	61.15	60.38
AT2G40435.1	Thale cress	mitochondrion, nucleus	60.51	60.13
PGSC0003DMT400071914	Potato	cytosol	60.51	59.38
Os07t0676600-01	Rice	cytosol	59.24	59.24
KRH40793	Soybean	cytosol	57.32	59.21
CDY23908	Canola	nucleus	59.24	58.49
KRH65496	Soybean	mitochondrion	55.41	58.0
KRH00396	Soybean	nucleus	56.05	57.89
KRH76078	Soybean	mitochondrion	54.78	57.33
Bra004568.1-P	Field mustard	nucleus	57.32	56.96
CDX79988	Canola	nucleus	57.32	56.96
AT3G56220.1	Thale cress	nucleus	55.41	55.77
Os03t0338400-01	Rice	nucleus	57.32	55.21
CDY45386	Canola	cytosol	56.05	55.0
CDY06993	Canola	nucleus	42.04	54.55
TraesCS4A01G136800.2	Wheat	mitochondrion	55.41	54.38
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	55.41	54.38
CDY32003	Canola	cytosol	54.14	54.14
Bra007228.1-P	Field mustard	cytosol	54.14	54.14
CDX67638	Canola	cytosol	54.14	54.14
Bra003232.1-P	Field mustard	cytosol	54.14	54.14
CDY27232	Canola	cytosol	54.14	54.14
CDY71264	Canola	cytosol	54.14	54.14
CDY52931	Canola	cytosol, mitochondrion	48.41	53.9
CDX72157	Canola	cytosol	52.87	52.87
TraesCS4B01G167700.1	Wheat	mitochondrion	53.5	52.83
EER92303	Sorghum	mitochondrion	54.78	52.44
Os05t0337200-01	Rice	cytosol, mitochondrion	50.32	51.63
HORVU4Hr1G049550.2	Barley	mitochondrion	52.23	51.57
TraesCS2B01G126400.1	Wheat	mitochondrion	50.96	50.96
Zm00001d029078_P002	Maize	mitochondrion	52.87	50.61
CDX76055	Canola	cytosol	49.68	50.32
TraesCS2D01G108900.1	Wheat	mitochondrion	49.68	50.0
Bra017003.1-P	Field mustard	cytosol	40.13	49.61
KXG36938	Sorghum	cytosol	53.5	49.12
Bra016997.1-P	Field mustard	cytosol	33.76	49.07
CDY43345	Canola	cytosol	42.68	48.55
Zm00001d047512_P002	Maize	cytosol, mitochondrion	52.23	48.52
Bra014704.1-P	Field mustard	cytosol	49.68	48.45
KRH30146	Soybean	mitochondrion	47.77	47.17
KRH17139	Soybean	mitochondrion	47.77	47.17
Zm00001d000400_P001	Maize	nucleus	49.68	46.43
KRH72775	Soybean	mitochondrion	46.5	46.2
TraesCS2A01G108800.1	Wheat	mitochondrion	45.86	44.44
OQU77760	Sorghum	mitochondrion	54.78	42.36
CDX93181	Canola	cytosol	24.84	40.62
HORVU2Hr1G018600.1	Barley	mitochondrion	49.68	35.78
KRG98184	Soybean	extracellular, plastid	38.85	35.26

Protein Annotations

EMBL:ACUP02007129	EnsemblPlants:KRH31215	EnsemblPlantsGene:GLYMA_11G234800	EntrezGene:100814138	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638	ncoils:Coil	PANTHER:PTHR31945
PANTHER:PTHR31945:SF8	ProteinID:KRH31215	ProteinID:KRH31215.1	SUPFAM:SSF47459	UniParc:UPI000233D419	UniProt:I1LMX0
MapMan:15.5.32	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:32993579..32995277

Molecular Weight (calculated)

17524.8 Da

IEP (calculated)

6.117

GRAVY (calculated)

-0.445

Length

157 amino acids

Sequence
(BLAST)

001: MVSREQKRAA LHEKLQLLRS ITNSHALNKT SIIIDASKYI EELKQKVERL NQHVANAQTS SDQNTLPMVT VETLEKGFLI NVYSAKTCPG LLVSILESFE
101: EIGLNVLEAR VTCTDTFRFH AVGGKNEEQG DEGIDAQTVK QELGQAIKNW SQNADQK

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.