CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004568.1-P	Field mustard	nucleus	100.0	100.0
CDY23908	Canola	nucleus	87.34	86.79
AT2G40435.1	Thale cress	mitochondrion, nucleus	83.54	83.54
CDY45386	Canola	cytosol	79.11	78.12
CDY52931	Canola	cytosol, mitochondrion	64.56	72.34
CDY06993	Canola	nucleus	53.8	70.25
CDX72157	Canola	cytosol	65.82	66.24
CDY27232	Canola	cytosol	65.82	66.24
CDX67638	Canola	cytosol	65.19	65.61
CDY32003	Canola	cytosol	65.19	65.61
CDY71264	Canola	cytosol	65.19	65.61
CDX93181	Canola	cytosol	38.61	63.54
CDX76055	Canola	cytosol	56.96	58.06
KRH31215	Soybean	cytosol	56.96	57.32
KRG97660	Soybean	cytosol	56.33	56.69
CDY43345	Canola	cytosol	49.37	56.52
KRH73223	Soybean	cytosol	55.7	56.41
VIT_13s0067g02280.t01	Wine grape	cytosol	56.33	55.97
KRH14875	Soybean	cytosol	54.43	55.13
Solyc06g050840.2.1	Tomato	cytosol	51.9	51.57
PGSC0003DMT400071914	Potato	cytosol	51.27	50.62
Os07t0676600-01	Rice	cytosol	48.73	49.04
Os03t0338400-01	Rice	nucleus	49.37	47.85
EER92303	Sorghum	mitochondrion	48.73	46.95
Zm00001d029078_P002	Maize	mitochondrion	47.47	45.73
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	46.2	45.62
TraesCS4A01G136800.2	Wheat	mitochondrion	45.57	45.0
Zm00001d047512_P002	Maize	cytosol, mitochondrion	48.1	44.97
Os05t0337200-01	Rice	cytosol, mitochondrion	43.04	44.44
TraesCS4B01G167700.1	Wheat	mitochondrion	44.3	44.03
TraesCS2B01G126400.1	Wheat	mitochondrion	43.04	43.31
TraesCS2D01G108900.1	Wheat	mitochondrion	42.41	42.95
HORVU4Hr1G049550.2	Barley	mitochondrion	43.04	42.77
KXG36938	Sorghum	cytosol	44.94	41.52
TraesCS2A01G108800.1	Wheat	mitochondrion	38.61	37.65
Zm00001d000400_P001	Maize	nucleus	39.24	36.9
OQU77760	Sorghum	mitochondrion	40.51	31.53
HORVU2Hr1G018600.1	Barley	mitochondrion	41.77	30.28

Protein Annotations

EnsemblPlants:CDX79988	EnsemblPlantsGene:GSBRNA2T00132855001	GO:A0A078CXZ1	PANTHER:PTHR31945	PANTHER:PTHR31945:SF43	ProteinID:CDX79988
ProteinID:CDX79988.1	UniParc:UPI00025474C6	MapMan:35.2	:	:	:

Description

BnaA05g01680D

Coordinates

chrLK031819:-:1187024..1188685

Molecular Weight (calculated)

17293.4 Da

IEP (calculated)

4.644

GRAVY (calculated)

-0.489

Length

158 amino acids

Sequence
(BLAST)

001: MDPREKKRGS LKEKFQLLRS ITNSHAENDT SIIMDASKYI KKLKKKVERF KGDTTAGQSS SEPTDPTIPM VTVETLEKGF MINVFAGKNQ PGMLVSVLEA
101: FEDIGLNVLD ARVSCTDSFS LHATGVENED GEGMDSEAVK QAVTDAITSW SESSDLQS

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.