CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73223	Soybean	cytosol	97.44	97.44
KRH31215	Soybean	cytosol	77.56	77.07
KRG97660	Soybean	cytosol	75.64	75.16
VIT_13s0067g02280.t01	Wine grape	cytosol	71.79	70.44
Os07t0676600-01	Rice	cytosol	62.18	61.78
KRH40793	Soybean	cytosol	58.97	60.53
KRH65496	Soybean	mitochondrion	57.69	60.0
KRH76078	Soybean	mitochondrion	57.05	59.33
Solyc06g050840.2.1	Tomato	cytosol	60.26	59.12
PGSC0003DMT400071914	Potato	cytosol	60.26	58.75
KRH00396	Soybean	nucleus	57.05	58.55
Os03t0338400-01	Rice	nucleus	60.9	58.28
AT2G40435.1	Thale cress	mitochondrion, nucleus	58.33	57.59
EER92303	Sorghum	mitochondrion	59.62	56.71
AT3G56220.1	Thale cress	nucleus	56.41	56.41
Os05t0337200-01	Rice	cytosol, mitochondrion	54.49	55.56
CDY32003	Canola	cytosol	55.77	55.41
Bra003232.1-P	Field mustard	cytosol	55.77	55.41
CDX67638	Canola	cytosol	55.77	55.41
CDY71264	Canola	cytosol	55.77	55.41
CDY23908	Canola	nucleus	56.41	55.35
CDY27232	Canola	cytosol	55.13	54.78
CDX72157	Canola	cytosol	55.13	54.78
Bra007228.1-P	Field mustard	cytosol	55.13	54.78
CDX79988	Canola	nucleus	55.13	54.43
Bra004568.1-P	Field mustard	nucleus	55.13	54.43
TraesCS4A01G136800.2	Wheat	mitochondrion	55.77	54.38
Zm00001d029078_P002	Maize	mitochondrion	57.05	54.27
TraesCS4B01G167700.1	Wheat	mitochondrion	55.13	54.09
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	55.13	53.75
TraesCS2B01G126400.1	Wheat	mitochondrion	53.85	53.5
HORVU4Hr1G049550.2	Barley	mitochondrion	54.49	53.46
Zm00001d047512_P002	Maize	cytosol, mitochondrion	57.69	53.25
KXG36938	Sorghum	cytosol	58.33	53.22
TraesCS2D01G108900.1	Wheat	mitochondrion	53.21	53.21
CDY45386	Canola	cytosol	54.49	53.12
CDY52931	Canola	cytosol, mitochondrion	46.79	51.77
CDY06993	Canola	nucleus	39.74	51.24
Zm00001d000400_P001	Maize	nucleus	53.21	49.4
Bra017003.1-P	Field mustard	cytosol	39.74	48.82
KRH17139	Soybean	mitochondrion	49.36	48.43
CDX76055	Canola	cytosol	48.08	48.39
CDY43345	Canola	cytosol	42.31	47.83
Bra016997.1-P	Field mustard	cytosol	32.69	47.22
Bra014704.1-P	Field mustard	cytosol	48.72	47.2
KRH30146	Soybean	mitochondrion	48.08	47.17
TraesCS2A01G108800.1	Wheat	mitochondrion	48.72	46.91
KRH72775	Soybean	mitochondrion	46.79	46.2
OQU77760	Sorghum	mitochondrion	57.69	44.34
CDX93181	Canola	cytosol	25.64	41.67
HORVU2Hr1G018600.1	Barley	mitochondrion	53.85	38.53
KRG98184	Soybean	extracellular, plastid	37.18	33.53

Protein Annotations

EMBL:ACUP02008537	EnsemblPlants:KRH14875	EnsemblPlantsGene:GLYMA_14G053900	EntrezGene:100797684	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638	ncoils:Coil	PANTHER:PTHR31945
PANTHER:PTHR31945:SF8	ProteinID:KRH14875	ProteinID:KRH14875.1	SEG:seg	SUPFAM:SSF47459	UniParc:UPI000233AFF0
UniProt:I1M7N4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:4258860..4260673

Molecular Weight (calculated)

17379.8 Da

IEP (calculated)

5.630

GRAVY (calculated)

-0.228

Length

156 amino acids

Sequence
(BLAST)

001: MVSKEQKRAA LHEKLQHLRS ITNSHALNKT SIIVDASKYI EKLKQKVEIL NQEIASAETS SVHNPLPMVT VETLEKGFLI NVFSAKGCSG LLVSILEAFE
101: EMRLTVLEAR VSCTDTFRFQ AVGENEEQAE TIDAHVVQQA VVQAIKNWSK SGDQEE

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.