Factsheet for Zm00001d029078_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92303	Sorghum	mitochondrion	94.51	94.51
Zm00001d047512_P002	Maize	cytosol, mitochondrion	93.29	90.53
Os03t0338400-01	Rice	nucleus	76.83	77.3
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	73.78	75.62
TraesCS4A01G136800.2	Wheat	mitochondrion	73.78	75.62
TraesCS4B01G167700.1	Wheat	mitochondrion	73.17	75.47
HORVU4Hr1G049550.2	Barley	mitochondrion	72.56	74.84
KRH73223	Soybean	cytosol	55.49	58.33
GSMUA_Achr10P...	Banana	cytosol	54.27	57.79
KRH14875	Soybean	cytosol	54.27	57.05
VIT_08s0058g00960.t01	Wine grape	mitochondrion	53.66	56.41
VIT_13s0067g02280.t01	Wine grape	cytosol	54.27	55.97
KRH65496	Soybean	mitochondrion	49.39	54.0
KRH76078	Soybean	mitochondrion	48.78	53.33
VIT_06s0004g07700.t01	Wine grape	mitochondrion	51.83	53.12
KRH31215	Soybean	cytosol	50.61	52.87
KRG97660	Soybean	cytosol	50.61	52.87
Zm00001d000400_P001	Maize	nucleus	53.66	52.38
AT2G40435.1	Thale cress	mitochondrion, nucleus	49.39	51.27
KRH40793	Soybean	cytosol	46.34	50.0
KRH00396	Soybean	nucleus	44.51	48.03
Solyc06g050840.2.1	Tomato	cytosol	46.34	47.8
CDX79988	Canola	nucleus	45.73	47.47
Bra004568.1-P	Field mustard	nucleus	45.73	47.47
CDY23908	Canola	nucleus	45.73	47.17
CDX67638	Canola	cytosol	45.12	47.13
Bra007228.1-P	Field mustard	cytosol	45.12	47.13
Bra003232.1-P	Field mustard	cytosol	45.12	47.13
CDY27232	Canola	cytosol	45.12	47.13
CDY32003	Canola	cytosol	45.12	47.13
CDY71264	Canola	cytosol	45.12	47.13
PGSC0003DMT400071914	Potato	cytosol	45.73	46.88
AT3G56220.1	Thale cress	nucleus	44.51	46.79
CDY06993	Canola	nucleus	34.15	46.28
CDY52931	Canola	cytosol, mitochondrion	39.63	46.1
CDY45386	Canola	cytosol	44.51	45.62
CDX72157	Canola	cytosol	43.29	45.22
CDX76055	Canola	cytosol	42.07	44.52
KRH17139	Soybean	mitochondrion	42.68	44.03
CDY43345	Canola	cytosol	36.59	43.48
Bra014704.1-P	Field mustard	cytosol	42.07	42.86
KRH72775	Soybean	mitochondrion	40.85	42.41
Bra017003.1-P	Field mustard	cytosol	32.32	41.73
Bra016997.1-P	Field mustard	cytosol	27.44	41.67
KRH30146	Soybean	mitochondrion	39.63	40.88
Solyc09g018500.1.1	Tomato	cytosol	39.63	36.72
CDX93181	Canola	cytosol	21.34	36.46
PGSC0003DMT400068342	Potato	cytosol, nucleus, peroxisome	39.02	36.36
KRG98184	Soybean	extracellular, plastid	32.93	31.21

Protein Annotations

EMBL:BT037959	EMBL:EU954152	EnsemblPlants:Zm00001d029078_P002	EnsemblPlants:Zm00001d029078_T002	EnsemblPlantsGene:Zm00001d029078	EntrezGene:100216770
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638
ncoils:Coil	PANTHER:PTHR31945	PANTHER:PTHR31945:SF43	ProteinID:ONL97833.1	ProteinID:ONL97834.1	SUPFAM:SSF47459
UniParc:UPI00017B6AED	UniProt:B4FLH1	MapMan:35.2	:	:	:

Description

IDP1489DNA binding protein [Source:UniProtKB/TrEMBL;Acc:B4FLH1]

Coordinates

chr1:-:57267805..57269655

Molecular Weight (calculated)

17673.0 Da

IEP (calculated)

5.268

GRAVY (calculated)

-0.082

Length

164 amino acids

Sequence
(BLAST)

001: MMSRERKKAA ALQEKLKILR SITHSHALSN TSIIMDASAY IKELKQKVVR LNQEIACAQD ALRHKASSYP TVTVEALGVQ GSSFLVNVFS DKSCPGLLVA
101: VLEAFDELGL SVLQATASCA DSFRLEAVGG ENVADNVDEH VVKQAVLQAV RSCSEGGSEH DDEE

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.