CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17139	Soybean	mitochondrion	84.81	84.28
KRH30146	Soybean	mitochondrion	58.86	58.49
VIT_06s0004g07700.t01	Wine grape	mitochondrion	52.53	51.88
KRG98184	Soybean	extracellular, plastid	53.16	48.55
KRH14875	Soybean	cytosol	46.2	46.79
KRH73223	Soybean	cytosol	46.2	46.79
KRH31215	Soybean	cytosol	46.2	46.5
KRH65496	Soybean	mitochondrion	43.04	45.33
KRG97660	Soybean	cytosol	44.94	45.22
KRH76078	Soybean	mitochondrion	41.77	44.0
KRH40793	Soybean	cytosol	41.77	43.42
TraesCS4A01G136800.2	Wheat	mitochondrion	43.04	42.5
KRH00396	Soybean	nucleus	40.51	42.11
Os07t0676600-01	Rice	cytosol	41.77	42.04
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	42.41	41.88
Os03t0338400-01	Rice	nucleus	43.04	41.72
HORVU4Hr1G049550.2	Barley	mitochondrion	41.77	41.51
TraesCS4B01G167700.1	Wheat	mitochondrion	41.77	41.51
TraesCS2B01G126400.1	Wheat	mitochondrion	41.14	41.4
Os05t0337200-01	Rice	cytosol, mitochondrion	39.87	41.18
TraesCS2D01G108900.1	Wheat	mitochondrion	40.51	41.03
Zm00001d029078_P002	Maize	mitochondrion	42.41	40.85
EER92303	Sorghum	mitochondrion	42.41	40.85
Zm00001d047512_P002	Maize	cytosol, mitochondrion	41.77	39.05
KXG36938	Sorghum	cytosol	41.14	38.01
TraesCS2A01G108800.1	Wheat	mitochondrion	37.34	36.42
Zm00001d000400_P001	Maize	nucleus	37.97	35.71
OQU77760	Sorghum	mitochondrion	42.41	33.0
HORVU2Hr1G018600.1	Barley	mitochondrion	40.51	29.36

Protein Annotations

EMBL:ACUP02001242	EnsemblPlants:KRH72775	EnsemblPlantsGene:GLYMA_02G233300	EntrezGene:100306300	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	ncoils:Coil	PANTHER:PTHR31945	PANTHER:PTHR31945:SF8	ProteinID:KRH72775
ProteinID:KRH72775.1	UniParc:UPI0002337957	UniProt:K7KAA7	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr2:+:42088692..42090406

Molecular Weight (calculated)

18054.1 Da

IEP (calculated)

9.950

GRAVY (calculated)

-0.246

Length

158 amino acids

Sequence
(BLAST)

001: MVSRVHKRTA VYRRIQQLRS ITNSHARRKT SVILDASKYI RGLKQKLQEL NQLAVAATQK DIEYGPMPML KVEQQEEGYL IKVLSQRSCQ GLLAFILEAF
101: ERLGLVVLQA RASCVESFCL EAFGIKESNE DTRLVDTQVV EQVVSKAIND WRKVTKQC

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.