Factsheet for Os07t0676600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0338400-01	Rice	nucleus	79.62	76.69
KXG36938	Sorghum	cytosol	73.89	67.84
KRH73223	Soybean	cytosol	63.06	63.46
KRH14875	Soybean	cytosol	61.78	62.18
VIT_08s0058g00960.t01	Wine grape	mitochondrion	60.51	60.9
GSMUA_Achr10P...	Banana	cytosol	59.24	60.39
VIT_13s0067g02280.t01	Wine grape	cytosol	61.15	60.38
KRH31215	Soybean	cytosol	59.24	59.24
KRH65496	Soybean	mitochondrion	54.78	57.33
KRG97660	Soybean	cytosol	57.32	57.32
Os05t0337200-01	Rice	cytosol, mitochondrion	55.41	56.86
KRH76078	Soybean	mitochondrion	54.14	56.67
VIT_06s0004g07700.t01	Wine grape	mitochondrion	55.41	54.38
KRH40793	Soybean	cytosol	50.96	52.63
Solyc06g050840.2.1	Tomato	cytosol	52.87	52.2
PGSC0003DMT400071914	Potato	cytosol	52.87	51.88
KRH00396	Soybean	nucleus	49.68	51.32
AT2G40435.1	Thale cress	mitochondrion, nucleus	49.68	49.37
CDX79988	Canola	nucleus	49.04	48.73
Bra004568.1-P	Field mustard	nucleus	49.04	48.73
CDY32003	Canola	cytosol	47.77	47.77
CDX67638	Canola	cytosol	47.77	47.77
CDY71264	Canola	cytosol	47.77	47.77
Bra003232.1-P	Field mustard	cytosol	47.77	47.77
AT3G56220.1	Thale cress	nucleus	47.13	47.44
Bra007228.1-P	Field mustard	cytosol	47.13	47.13
CDY27232	Canola	cytosol	47.13	47.13
CDY52931	Canola	cytosol, mitochondrion	42.04	46.81
CDY23908	Canola	nucleus	47.13	46.54
CDY06993	Canola	nucleus	35.67	46.28
CDX72157	Canola	cytosol	45.86	45.86
CDY45386	Canola	cytosol	44.59	43.75
KRH17139	Soybean	mitochondrion	43.95	43.4
Os11t0111800-00	Rice	cytosol, nucleus, plastid	43.95	42.86
Os12t0111400-01	Rice	cytosol, nucleus, plastid	26.11	42.71
CDX76055	Canola	cytosol	42.04	42.58
CDY43345	Canola	cytosol	36.94	42.03
KRH72775	Soybean	mitochondrion	42.04	41.77
Bra016997.1-P	Field mustard	cytosol	28.66	41.67
Bra014704.1-P	Field mustard	cytosol	42.68	41.61
KRH30146	Soybean	mitochondrion	42.04	41.51
Bra017003.1-P	Field mustard	cytosol	32.48	40.16
PGSC0003DMT400068342	Potato	cytosol, nucleus, peroxisome	42.68	38.07
Solyc09g018500.1.1	Tomato	cytosol	42.68	37.85
CDX93181	Canola	cytosol	20.38	33.33
KRG98184	Soybean	extracellular, plastid	35.03	31.79

Protein Annotations

MapMan:35.2	EntrezGene:9270706	EMBL:AK242001	ProteinID:BAC10078.1	ProteinID:BAT03201.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638	EnsemblPlantsGene:Os07g0676600	EnsemblPlants:Os07t0676600-01
PANTHER:PTHR31945	PANTHER:PTHR31945:SF24	UniProt:Q8LII5	SUPFAM:SSF47459	UniParc:UPI00000A32DB	RefSeq:XP_015644890.1

Description

basic helix-loop-helix protein 163Similar to DNA binding protein. (Os07t0676600-01)

Coordinates

chr7:+:28649695..28651518

Molecular Weight (calculated)

17053.2 Da

IEP (calculated)

5.015

GRAVY (calculated)

-0.141

Length

157 amino acids

Sequence
(BLAST)

001: MMSRERKKAA ALHEKLQILR SITHSHALSN TSIITDASEY IKELKQKVVR LNKEIACAEA AALRQNSIPT VTVETLGHGF LINVFSDKSC PGLLVSILEA
101: FDELGLNVLE ATASCDDTFR LEAVGGENQV DEHVIKQTVL QAISNSNCSE SSGDQEG

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.