CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31215	Soybean	cytosol	90.45	90.45
KRH73223	Soybean	cytosol	76.43	76.92
KRH14875	Soybean	cytosol	75.16	75.64
VIT_13s0067g02280.t01	Wine grape	cytosol	68.79	67.92
Solyc06g050840.2.1	Tomato	cytosol	59.87	59.12
AT2G40435.1	Thale cress	mitochondrion, nucleus	59.24	58.86
KRH40793	Soybean	cytosol	56.69	58.55
PGSC0003DMT400071914	Potato	cytosol	58.6	57.5
KRH76078	Soybean	mitochondrion	54.78	57.33
KRH65496	Soybean	mitochondrion	54.78	57.33
Os07t0676600-01	Rice	cytosol	57.32	57.32
KRH00396	Soybean	nucleus	55.41	57.24
CDY23908	Canola	nucleus	57.32	56.6
CDX79988	Canola	nucleus	56.69	56.33
Bra004568.1-P	Field mustard	nucleus	56.69	56.33
CDY45386	Canola	cytosol	57.32	56.25
AT3G56220.1	Thale cress	nucleus	54.78	55.13
CDY32003	Canola	cytosol	54.78	54.78
CDY71264	Canola	cytosol	54.78	54.78
Bra003232.1-P	Field mustard	cytosol	54.78	54.78
Bra007228.1-P	Field mustard	cytosol	54.78	54.78
CDY27232	Canola	cytosol	54.78	54.78
CDX67638	Canola	cytosol	54.78	54.78
CDY52931	Canola	cytosol, mitochondrion	49.04	54.61
Os03t0338400-01	Rice	nucleus	56.69	54.6
CDY06993	Canola	nucleus	42.04	54.55
TraesCS4D01G170400.1	Wheat	cytosol, mitochondrion	55.41	54.38
TraesCS4A01G136800.2	Wheat	mitochondrion	54.78	53.75
CDX72157	Canola	cytosol	52.87	52.87
Bra017003.1-P	Field mustard	cytosol	42.68	52.76
EER92303	Sorghum	mitochondrion	54.78	52.44
TraesCS4B01G167700.1	Wheat	mitochondrion	52.87	52.2
Os05t0337200-01	Rice	cytosol, mitochondrion	49.68	50.98
HORVU4Hr1G049550.2	Barley	mitochondrion	51.59	50.94
Bra016997.1-P	Field mustard	cytosol	35.03	50.93
Zm00001d029078_P002	Maize	mitochondrion	52.87	50.61
CDX76055	Canola	cytosol	49.68	50.32
TraesCS2B01G126400.1	Wheat	mitochondrion	50.32	50.32
TraesCS2D01G108900.1	Wheat	mitochondrion	49.04	49.36
CDY43345	Canola	cytosol	43.31	49.28
KXG36938	Sorghum	cytosol	52.87	48.54
Zm00001d047512_P002	Maize	cytosol, mitochondrion	52.23	48.52
Bra014704.1-P	Field mustard	cytosol	49.68	48.45
KRH30146	Soybean	mitochondrion	48.41	47.8
Zm00001d000400_P001	Maize	nucleus	49.68	46.43
KRH17139	Soybean	mitochondrion	46.5	45.91
KRH72775	Soybean	mitochondrion	45.22	44.94
CDX93181	Canola	cytosol	26.75	43.75
TraesCS2A01G108800.1	Wheat	mitochondrion	44.59	43.21
OQU77760	Sorghum	mitochondrion	55.41	42.86
HORVU2Hr1G018600.1	Barley	mitochondrion	49.04	35.32
KRG98184	Soybean	extracellular, plastid	38.85	35.26

Protein Annotations

EMBL:ACUP02010805	EnsemblPlants:KRG97660	EnsemblPlantsGene:GLYMA_18G022200	EntrezGene:100813030	Gene3D:4.10.280.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638	ncoils:Coil
PANTHER:PTHR31945	PANTHER:PTHR31945:SF8	ProteinID:KRG97660	ProteinID:KRG97660.1	SUPFAM:SSF47459	UniParc:UPI000233EF94
UniProt:I1MYX5	MapMan:15.5.32	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:1623143..1624852

Molecular Weight (calculated)

17514.8 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.459

Length

157 amino acids

Sequence
(BLAST)

001: MVSREQKRAT LNEKLQLLRS ITNSNALDKT SIIIDASKYI EELKEKVERL NQDVANAQTS SDQNTLPMVT VETLEKGFLI NVFSAKSCPG LLVSILESFE
101: EMGLHVLEAR VTCKDTFRFH AVGGKNEEQG DEDIDAQAVK QAMGQAIKNW SQNADQK

Best Arabidopsis Sequence Match ( AT2G40435.1 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.