Factsheet for TraesCS2A01G108800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G126400.1	Wheat	mitochondrion	77.78	80.25
TraesCS2D01G108900.1	Wheat	mitochondrion	77.16	80.13
TraesCS4A01G136800.2	Wheat	mitochondrion	60.49	61.25
HORVU2Hr1G018600.1	Barley	mitochondrion	80.86	60.09
GSMUA_Achr10P...	Banana	cytosol	47.53	50.0
KRH73223	Soybean	cytosol	47.53	49.36
KRH14875	Soybean	cytosol	46.91	48.72
VIT_08s0058g00960.t01	Wine grape	mitochondrion	45.68	47.44
VIT_13s0067g02280.t01	Wine grape	cytosol	46.3	47.17
KRH65496	Soybean	mitochondrion	43.21	46.67
KRH76078	Soybean	mitochondrion	42.59	46.0
KRH31215	Soybean	cytosol	44.44	45.86
VIT_06s0004g07700.t01	Wine grape	mitochondrion	45.06	45.62
KRG97660	Soybean	cytosol	43.21	44.59
AT2G40435.1	Thale cress	mitochondrion, nucleus	41.98	43.04
Solyc06g050840.2.1	Tomato	cytosol	41.98	42.77
PGSC0003DMT400071914	Potato	cytosol	41.98	42.5
CDY06993	Canola	nucleus	31.48	42.15
CDY52931	Canola	cytosol, mitochondrion	36.42	41.84
KRH40793	Soybean	cytosol	38.89	41.45
KRH00396	Soybean	nucleus	38.27	40.79
CDY32003	Canola	cytosol	38.27	39.49
CDX67638	Canola	cytosol	38.27	39.49
CDY71264	Canola	cytosol	38.27	39.49
Bra003232.1-P	Field mustard	cytosol	38.27	39.49
AT3G56220.1	Thale cress	nucleus	37.65	39.1
Bra007228.1-P	Field mustard	cytosol	37.65	38.85
CDX72157	Canola	cytosol	37.65	38.85
CDY27232	Canola	cytosol	37.65	38.85
Bra004568.1-P	Field mustard	nucleus	37.65	38.61
CDX79988	Canola	nucleus	37.65	38.61
KRH17139	Soybean	mitochondrion	37.65	38.36
CDY23908	Canola	nucleus	37.65	38.36
CDY45386	Canola	cytosol	37.65	38.12
Bra016997.1-P	Field mustard	cytosol	25.31	37.96
KRH72775	Soybean	mitochondrion	36.42	37.34
KRH30146	Soybean	mitochondrion	35.19	35.85
CDX76055	Canola	cytosol	33.95	35.48
Bra017003.1-P	Field mustard	cytosol	27.16	34.65
Solyc09g018500.1.1	Tomato	cytosol	37.65	34.46
Bra014704.1-P	Field mustard	cytosol	33.95	34.16
PGSC0003DMT400068342	Potato	cytosol, nucleus, peroxisome	36.42	33.52
CDY43345	Canola	cytosol	27.78	32.61
KRG98184	Soybean	extracellular, plastid	30.25	28.32
CDX93181	Canola	cytosol	15.43	26.04

Protein Annotations

EnsemblPlants:TraesCS2A01G108800.1	EnsemblPlantsGene:TraesCS2A01G108800	ncoils:Coil	PANTHER:PTHR31945	PANTHER:PTHR31945:SF24	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:60805879..60806903

Molecular Weight (calculated)

17538.0 Da

IEP (calculated)

10.115

GRAVY (calculated)

-0.284

Length

162 amino acids

Sequence
(BLAST)

001: MSRERKKAAA ALQEKMQILR SITHSHALSN PSIVMDASEY IKGLKQKIAR LNQEIAREED AHSHKQNSFP TVSVEALGHG FLVNVSSDKS CPGLLVAVLE
101: AFEELGLTVL QATASCADTF RLEAVGGGEV RTTRRRVWMR MSSGGRCSTP SPTAARSKGI SS

Best Arabidopsis Sequence Match ( AT2G40435.2 )
(BLAST)

001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLEVIN

Arabidopsis Description

Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.