Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0111800-00 | Rice | cytosol, nucleus, plastid | 59.54 | 63.98 |
| Os12t0111400-01 | Rice | cytosol, nucleus, plastid | 32.95 | 59.38 |
| EER92303 | Sorghum | mitochondrion | 37.57 | 39.63 |
| KXG36938 | Sorghum | cytosol | 36.99 | 37.43 |
| OQU77760 | Sorghum | mitochondrion | 34.68 | 29.56 |
Protein Annotations
| EnsemblPlants:KXG27598 | EnsemblPlantsGene:SORBI_3005G009400 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF43 | ProteinID:KXG27598 | ProteinID:KXG27598.1 |
| SEG:seg | UniParc:UPI0003C72EB1 | UniProt:A0A1B6PPK0 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr5:+:746842..748512
Molecular Weight (calculated)
18378.4 Da
IEP (calculated)
4.298
GRAVY (calculated)
-0.376
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKEKKLLQ LLRSVTKSSA ANGTSILVDA SKYIKELKDK VEAASSSQAD TDTSSAFGSG SAMPATVSVS AVELDNSSRR RGFRINVSME RSRPGLLVSV
101: LEALEDLGLD VLDADVSCTD DTAFRFQALG GSSGQGLQQQ QQQQEEAGGS VDEQMVQHAV LQAITKCMDD DDE
101: LEALEDLGLD VLDADVSCTD DTAFRFQALG GSSGQGLQQQ QQQQEEAGGS VDEQMVQHAV LQAITKCMDD DDE
001: MVSREQKRGS LQEKFQLLRS ITNSHAENDT SIIMDASKYI QKLKQKVERF NQDPTAEQSS SEPTDPKTPM VTVETLDKGF MINVFSGKNQ PGMLVSVLEA
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN
101: FEDIGLNVLE ARASCTDSFS LHAMGLENED GENMDAEAVK QAVTDAIRSW GEINDPQN
Arabidopsis Description
Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.