Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P22670_001 | Banana | plasma membrane | 4.31 | 5.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P22660_001 | EnsemblPlants:GSMUA_Achr8T22660_001 | EnsemblPlantsGene:GSMUA_Achr8G22660_001 | InterPro:TMEM192 | ncoils:Coil | PANTHER:PTHR31592 |
| SEG:seg | UniParc:UPI000294CA56 | UniProt:M0TSR9 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G22660_001]
Coordinates
chr8:-:27234014..27239641
Molecular Weight (calculated)
26698.5 Da
IEP (calculated)
6.041
GRAVY (calculated)
-0.625
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHSGCESS EHKLLVSVIP THNQGNSMIK LTFFIKQAIY KSWCIHQYNS LNGQPDILKS LYSALQPSSS LEDLRYYDGG RLSDQQMALL QYQRENLHYL
101: SEEVLRLQEC LSKYQRSDDG STPQVDLAHL LASRDQELRA LTAEMNQVHS ELRLARSLIA ERDSEVQHMR ATNNQYVEEN ERLRAILGEW SARAAKLERA
201: LEAERMSIVE LQKSIAELRS KPPNQLADEH QE
101: SEEVLRLQEC LSKYQRSDDG STPQVDLAHL LASRDQELRA LTAEMNQVHS ELRLARSLIA ERDSEVQHMR ATNNQYVEEN ERLRAILGEW SARAAKLERA
201: LEAERMSIVE LQKSIAELRS KPPNQLADEH QE
001: MLRFWLSQGY YSFSQKLKHV VRLPFAIAAY GTAAMLLVIV WRPQIHILSI SSLQRIIMLV EAVGAGFFMG LYIGYVHQYN SVNSRPDVLK SLYSPLQPSS
101: SMEGLRYYEG RLSDQQTALL QYQRENLHFL SEEILCLQEK LSKYEQSDDG STPQVDLAHL LAARDQELRT LSAEMNQLQS ELRLARSLIA ERDAEVQRVN
201: STNNQYIEEN ERLRAILSEW SMRAANLERA LEVERMSNSE LQKEVASTRR KQMLETTTSE QP
101: SMEGLRYYEG RLSDQQTALL QYQRENLHFL SEEILCLQEK LSKYEQSDDG STPQVDLAHL LAARDQELRT LSAEMNQLQS ELRLARSLIA ERDAEVQRVN
201: STNNQYIEEN ERLRAILSEW SMRAANLERA LEVERMSNSE LQKEVASTRR KQMLETTTSE QP
Arabidopsis Description
FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.