Factsheet for GSMUA_Achr8P22670_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G367400.1	Wheat	plasma membrane	66.47	32.01
TraesCS6A01G336900.1	Wheat	plasma membrane	65.88	31.82
EES05887	Sorghum	peroxisome	65.29	31.36
TraesCS6D01G317300.1	Wheat	plasma membrane	65.29	31.27
Os02t0778300-01	Rice	plasma membrane	65.29	31.18
VIT_11s0016g01110.t01	Wine grape	plasma membrane	64.12	30.88
TraesCS7B01G069200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	66.47	30.71
TraesCS7A01G163400.1	Wheat	plasma membrane	65.88	30.43
TraesCS7D01G165500.3	Wheat	plasma membrane	65.29	30.16
AT2G06005.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	62.35	29.86
Solyc12g009100.1.1	Tomato	plasma membrane	60.0	29.31
KRH12539	Soybean	endoplasmic reticulum, peroxisome, plastid	61.18	29.21
Zm00001d018275_P001	Maize	peroxisome	64.71	29.02
Bra015180.1-P	Field mustard	plasma membrane	62.35	28.8
HORVU6Hr1G081380.8	Barley	plasma membrane	65.88	28.72
KRH37493	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	59.41	28.37
CDY51843	Canola	cytosol, peroxisome, plasma membrane	57.06	27.79
CDX70932	Canola	cytosol, mitochondrion, peroxisome	57.06	27.79
Bra006566.1-P	Field mustard	cytosol, nucleus, peroxisome	57.06	27.79
AT5G20580.2	Thale cress	cytosol, peroxisome, vacuole	55.88	27.3
CDY64735	Canola	cytosol, nucleus, plasma membrane	62.35	19.59
CDY33404	Canola	plasma membrane	62.35	19.59
Solyc07g041890.1.1	Tomato	nucleus	27.65	18.65
GSMUA_Achr8P22660_001	Banana	nucleus	5.88	4.31
PGSC0003DMT400048982	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P22670_001	EnsemblPlants:GSMUA_Achr8T22670_001	EnsemblPlantsGene:GSMUA_Achr8G22670_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM192	PANTHER:PTHR31592	PFAM:PF14802	SEG:seg	TMHMM:TMhelix	UniParc:UPI00029599BA
UniProt:M0TSS0	MapMan:35.1	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G22670_001]

Coordinates

chr8:-:27239833..27250502

Molecular Weight (calculated)

18998.9 Da

IEP (calculated)

9.185

GRAVY (calculated)

0.751

Length

170 amino acids

Sequence
(BLAST)

001: MAHERPSSSP SASLTAEENN LFLDILHEAP LSGHRQPRGI FGSVLYCVVL AGYAVVAAAA PWIFLLVPKL VPTLLCSCNV LLLIITGIFQ QYWVYQVRKV
101: RLQGYYSFSQ RLKHIARLPF ATITYGSALM LLVLVWQPYI HILSISTLLR IIMIVEVICA GCFMSVYIGK

Best Arabidopsis Sequence Match ( AT2G06005.1 )
(BLAST)

001: MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP

Arabidopsis Description

FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.