Factsheet for Zm00001d018275_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05887	Sorghum	peroxisome	90.5	96.89
Os02t0778300-01	Rice	plasma membrane	78.36	83.43
TraesCS6B01G367400.1	Wheat	plasma membrane	77.31	83.0
TraesCS6A01G336900.1	Wheat	plasma membrane	76.78	82.67
TraesCS6D01G317300.1	Wheat	plasma membrane	76.52	81.69
HORVU6Hr1G081380.8	Barley	plasma membrane	73.35	71.28
GSMUA_Achr8P22670_001	Banana	plasma membrane	29.02	64.71
PGSC0003DMT400048982	Potato	cytosol	10.03	64.41
KRH12539	Soybean	endoplasmic reticulum, peroxisome, plastid	59.37	63.2
KRH37493	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	58.58	62.36
Solyc12g009100.1.1	Tomato	plasma membrane	56.73	61.78
VIT_11s0016g01110.t01	Wine grape	plasma membrane	55.94	60.06
AT5G20580.2	Thale cress	cytosol, peroxisome, vacuole	53.83	58.62
Bra006566.1-P	Field mustard	cytosol, nucleus, peroxisome	53.83	58.45
AT2G06005.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	54.62	58.31
CDY51843	Canola	cytosol, peroxisome, plasma membrane	53.56	58.17
CDX70932	Canola	cytosol, mitochondrion, peroxisome	53.56	58.17
Bra015180.1-P	Field mustard	plasma membrane	53.83	55.43
CDY64735	Canola	cytosol, nucleus, plasma membrane	53.56	37.52
CDY33404	Canola	plasma membrane	53.3	37.34
Solyc07g041890.1.1	Tomato	nucleus	19.79	29.76

Protein Annotations

EnsemblPlants:Zm00001d018275_P001	EnsemblPlants:Zm00001d018275_T001	EnsemblPlantsGene:Zm00001d018275	EntrezGene:100276172	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:TMEM192	ncoils:Coil	PFAM:PF14802	ProteinID:AQK75414.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000842699B	UniProt:A0A1D6HM14	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5:+:217763376..217784567

Molecular Weight (calculated)

42931.1 Da

IEP (calculated)

7.819

GRAVY (calculated)

-0.077

Length

379 amino acids

Sequence
(BLAST)

001: MAHERGAAAS AHPAAPTSEE DALFIDLLHE APLSGHREPR SIVGGTLYCI LLVGFAAVAI SAPWIFLFAP DMISPLLCSS NAILLVLTGI FQQYWVHQVR
101: KVRLQGYYDF SQKLKRIARL PFATIACGTA LMLLIMVWQP LLQILSVSLL LRIAIVVEVT CAGCFMGLYL WHIHKYNSLN GQPDILRSLY SALQPSNTLE
201: DRRYHDARLS DQQMALLQYQ RENIHYLSEE VETQCAVPVS PQLQLKQSSC KPLLKVLRLQ ECLSKYQRTA GTTPQVDLAH LLATRDQELR ALTAEMNQVH
301: SELQHARGLI DEKDSELQRI RLSNNQYVEE NDRLRAILGE WSARAAKLER ALEAERVSNV ELRKNIAKFR GHLYKEQEA

Best Arabidopsis Sequence Match ( AT2G06005.1 )
(BLAST)

001: MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP

Arabidopsis Description

FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.