Factsheet for AT2G06005.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	endoplasmic reticulum, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015180.1-P	Field mustard	plasma membrane	88.45	85.33
VIT_11s0016g01110.t01	Wine grape	plasma membrane	75.49	75.92
AT5G20580.2	Thale cress	cytosol, peroxisome, vacuole	70.42	71.84
KRH37493	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	71.83	71.63
KRH12539	Soybean	endoplasmic reticulum, peroxisome, plastid	71.55	71.35
Solyc12g009100.1.1	Tomato	plasma membrane	67.04	68.39
PGSC0003DMT400048982	Potato	cytosol	10.42	62.71
GSMUA_Achr8P22670_001	Banana	plasma membrane	29.86	62.35
TraesCS6B01G367400.1	Wheat	plasma membrane	60.28	60.62
TraesCS6A01G336900.1	Wheat	plasma membrane	60.0	60.51
Os02t0778300-01	Rice	plasma membrane	60.56	60.39
TraesCS6D01G317300.1	Wheat	plasma membrane	60.0	60.0
EES05887	Sorghum	peroxisome	58.31	58.47
TraesCS7B01G069200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	60.28	58.15
CDY64735	Canola	cytosol, nucleus, plasma membrane	87.89	57.67
CDY33404	Canola	plasma membrane	87.89	57.67
TraesCS7A01G163400.1	Wheat	plasma membrane	59.72	57.61
TraesCS7D01G165500.3	Wheat	plasma membrane	59.72	57.61
Zm00001d018275_P001	Maize	peroxisome	58.31	54.62
HORVU6Hr1G081380.8	Barley	plasma membrane	58.59	53.33

Protein Annotations

MapMan:35.1	EntrezGene:815154	ProteinID:AAM15099.1	ProteinID:AEC05992.2	ProteinID:AEC05993.1	ArrayExpress:AT2G06005
EnsemblPlantsGene:AT2G06005	RefSeq:AT2G06005	TAIR:AT2G06005	RefSeq:AT2G06005-TAIR-G	EnsemblPlants:AT2G06005.1	TAIR:AT2G06005.1
EMBL:AY086482	ncoils:Coil	Symbol:FIP1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	RefSeq:NP_001318204.1	RefSeq:NP_565332.1
PFAM:PF14802	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007616	PO:PO:0009046
PO:PO:0009047	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR31592	UniProt:Q8S8K9	InterPro:TMEM192
TMHMM:TMhelix	UniParc:UPI000009FE21	SEG:seg	:	:	:

Description

FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]

Coordinates

chr2:+:2332447..2336256

Molecular Weight (calculated)

40588.0 Da

IEP (calculated)

6.950

GRAVY (calculated)

-0.188

Length

355 amino acids

Sequence
(BLAST)

001: MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.