Factsheet for AT5G20580.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006566.1-P	Field mustard	cytosol, nucleus, peroxisome	93.68	93.41
CDY51843	Canola	cytosol, peroxisome, plasma membrane	93.68	93.41
CDX70932	Canola	cytosol, mitochondrion, peroxisome	93.1	92.84
AT2G06005.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	71.84	70.42
PGSC0003DMT400048982	Potato	cytosol	11.78	69.49
VIT_11s0016g01110.t01	Wine grape	plasma membrane	70.11	69.12
KRH37493	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	69.54	67.98
KRH12539	Soybean	endoplasmic reticulum, peroxisome, plastid	68.97	67.42
Solyc12g009100.1.1	Tomato	plasma membrane	63.51	63.51
Os02t0778300-01	Rice	plasma membrane	61.21	59.83
TraesCS6A01G336900.1	Wheat	plasma membrane	59.2	58.52
EES05887	Sorghum	peroxisome	59.48	58.47
TraesCS6B01G367400.1	Wheat	plasma membrane	59.2	58.36
TraesCS6D01G317300.1	Wheat	plasma membrane	59.2	58.03
TraesCS7B01G069200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	59.48	56.25
TraesCS7A01G163400.1	Wheat	plasma membrane	59.2	55.98
TraesCS7D01G165500.3	Wheat	plasma membrane	59.2	55.98
GSMUA_Achr8P22670_001	Banana	plasma membrane	27.3	55.88
Zm00001d018275_P001	Maize	peroxisome	58.62	53.83
HORVU6Hr1G081380.8	Barley	plasma membrane	58.33	52.05

Protein Annotations

MapMan:35.1	EntrezGene:832180	ProteinID:AED92863.1	EMBL:AK229238	ArrayExpress:AT5G20580	EnsemblPlantsGene:AT5G20580
RefSeq:AT5G20580	TAIR:AT5G20580	RefSeq:AT5G20580-TAIR-G	EnsemblPlants:AT5G20580.2	TAIR:AT5G20580.2	Unigene:At.31168
ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	RefSeq:NP_974816.1	PFAM:PF14802
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR31592	UniProt:Q0WP45	InterPro:TMEM192	TMHMM:TMhelix	UniParc:UPI000034F250	SEG:seg

Description

Putative uncharacterized protein At5g20580 [Source:UniProtKB/TrEMBL;Acc:Q0WP45]

Coordinates

chr5:-:6958597..6962916

Molecular Weight (calculated)

39725.0 Da

IEP (calculated)

7.251

GRAVY (calculated)

-0.090

Length

348 amino acids

Sequence
(BLAST)

001: MANDRRASSV NPSTEQDNAM FLDILHEAPL FGHRESRSLV GSCIYLIILA GYAILAAGAP WILQSVDYLI PSLLCSCNVA LLMLTGMFQQ YFVNQVQKIR
101: LQGYYSFSQK LKHVVRLPFA IMAYGTASML LFMEWRPYVS VLPIFTVQRF IMSVEAISAA SFMIVFVGYV RQYNSVNSQP DVLNSLYSPL QPAALEGLRY
201: HEAGRLSDQQ MALLQYQREN LHYLSEEILR LQESLSKYET NGSSTPQVDL AHLVATRDQE LRTLSAEVDQ LHSELNLARS LISERDREIQ HVRNTNNQYV
301: AENERLRAIL GEWSMRAAKL ERALEVERIS NIELRKKVSA LRDQRQVA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.