Factsheet for TraesCS7B01G069200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	endoplasmic reticulum, peroxisome, plasma membrane
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G329000.1
TraesCS5B01G543400.1
TraesCS5D01G544800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G06005.1	TraesCS4A01G329000.1	AT4G00650.1	19429606
AT2G06005.1	TraesCS5B01G543400.1	AT4G00650.1	19429606
AT2G06005.1	TraesCS5D01G544800.1	AT4G00650.1	19429606

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G165500.3	Wheat	plasma membrane	98.64	98.64
TraesCS7A01G163400.1	Wheat	plasma membrane	98.1	98.1
TraesCS6B01G367400.1	Wheat	plasma membrane	69.57	72.52
PGSC0003DMT400048982	Potato	cytosol	10.87	67.8
GSMUA_Achr8P22670_001	Banana	plasma membrane	30.71	66.47
KRH37493	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	62.5	64.61
KRH12539	Soybean	endoplasmic reticulum, peroxisome, plastid	62.5	64.61
VIT_11s0016g01110.t01	Wine grape	plasma membrane	60.33	62.89
Solyc12g009100.1.1	Tomato	plasma membrane	58.97	62.36
AT2G06005.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	58.15	60.28
AT5G20580.2	Thale cress	cytosol, peroxisome, vacuole	56.25	59.48
CDX70932	Canola	cytosol, mitochondrion, peroxisome	55.43	58.45
Bra006566.1-P	Field mustard	cytosol, nucleus, peroxisome	55.43	58.45
CDY51843	Canola	cytosol, peroxisome, plasma membrane	55.16	58.17
Bra015180.1-P	Field mustard	plasma membrane	57.34	57.34
CDY64735	Canola	cytosol, nucleus, plasma membrane	57.34	39.0
CDY33404	Canola	plasma membrane	57.07	38.82
Solyc07g041890.1.1	Tomato	nucleus	19.57	28.57

Protein Annotations

EnsemblPlants:TraesCS7B01G069200.1	EnsemblPlantsGene:TraesCS7B01G069200	InterPro:TMEM192	ncoils:Coil	PANTHER:PTHR31592	PFAM:PF14802
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7B:-:74659445..74665901

Molecular Weight (calculated)

41353.2 Da

IEP (calculated)

7.637

GRAVY (calculated)

-0.012

Length

368 amino acids

Sequence
(BLAST)

001: MAHERRGAAA SSAAAHDAAG EALFVDVVHE APLSGQRQPR SIVGGTLYCI LLAGYAGVVI AAPWIFVLIP DMILPLLCSC NVLLLIITGI FQQYWVHQVT
101: KVRLQGYYDL SQKLKRIARV PFAAIACGTA LLLLILVWQP QLEVLSISVL LRIALVVEVI SAGCFMSLYI GHIHKYNSLN EQPDILRPLY SALQPSSSLE
201: EIRYYDSRLS DQQMALLQYQ RENIHYLSEE VLRLQESLSK YHRSVAASTP QVDLTHLLAS RDQELRALSA EMNQVHSELR LARGLIAEKD SEIQHIRGNN
301: NQYVEENERL RAILGEWSTR AAKLERALEA ERVSNMELQK NRAKLRRQST REKIPDIPQS ESSSIGVL

Best Arabidopsis Sequence Match ( AT2G06005.1 )
(BLAST)

001: MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP

Arabidopsis Description

FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.