Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g009100.1.1 | Tomato | plasma membrane | 38.49 | 27.87 |
| GSMUA_Achr8P22670_001 | Banana | plasma membrane | 18.65 | 27.65 |
| TraesCS6A01G336900.1 | Wheat | plasma membrane | 30.16 | 21.59 |
| TraesCS6B01G367400.1 | Wheat | plasma membrane | 30.16 | 21.53 |
| EES05887 | Sorghum | peroxisome | 30.16 | 21.47 |
| TraesCS6D01G317300.1 | Wheat | plasma membrane | 29.76 | 21.13 |
| Zm00001d018275_P001 | Maize | peroxisome | 29.76 | 19.79 |
| TraesCS7A01G163400.1 | Wheat | plasma membrane | 28.57 | 19.57 |
| TraesCS7B01G069200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 28.57 | 19.57 |
| TraesCS7D01G165500.3 | Wheat | plasma membrane | 27.78 | 19.02 |
| Os02t0778300-01 | Rice | plasma membrane | 26.59 | 18.82 |
| HORVU6Hr1G081380.8 | Barley | plasma membrane | 28.57 | 18.46 |
Protein Annotations
| EnsemblPlants:Solyc07g041890.1.1 | EnsemblPlantsGene:Solyc07g041890.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:TMEM192 |
| PANTHER:PTHR31592 | TMHMM:TMhelix | UniParc:UPI000276BC03 | UniProt:K4CE55 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7:-:54457788..54461789
Molecular Weight (calculated)
29026.0 Da
IEP (calculated)
8.625
GRAVY (calculated)
0.567
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MGATWIFHPI RGLVFQLLCS CNIALLVISG NCVFSQKLKH IIHLPFATIA YRISLLGSLC ELLQCCWSWF WIQILAFFPY PHYSSDLPRT LLVFISWIIL
101: LAEVVCAASF MTLYIGYVHQ YNSFDSQPDV LKSLYSPLQP SNSLEGPRYL MGFMLLNLQK LFTSYLVPTS RNKLVDIKWF INVWLFQESL QNEELCRHSF
201: LFHIFSTFFG PQSTLPFSSL LSMEALICIL KGKKITQGII FSVYKGTTKL LF
101: LAEVVCAASF MTLYIGYVHQ YNSFDSQPDV LKSLYSPLQP SNSLEGPRYL MGFMLLNLQK LFTSYLVPTS RNKLVDIKWF INVWLFQESL QNEELCRHSF
201: LFHIFSTFFG PQSTLPFSSL LSMEALICIL KGKKITQGII FSVYKGTTKL LF
001: MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP
101: QGYYSFSQKL KHVVRLPFAI AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD VLKSLYSPLQ PSSSMEGLRY
201: YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301: EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP
Arabidopsis Description
FIP1Protein FIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8K9]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.