Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0542200-01 | Rice | cytosol | 18.62 | 41.56 |
| TraesCS5B01G309200.1 | Wheat | cytosol | 16.59 | 40.91 |
| TraesCS7D01G018400.1 | Wheat | cytosol | 12.07 | 40.81 |
| TraesCS5B01G034500.1 | Wheat | cytosol | 17.23 | 40.74 |
| TraesCS7B01G024800.1 | Wheat | cytosol, plastid | 14.93 | 40.3 |
| TraesCS5B01G034600.1 | Wheat | cytosol | 16.77 | 40.18 |
| HORVU7Hr1G000950.1 | Barley | cytosol | 19.35 | 38.67 |
| TraesCS7D01G017600.1 | Wheat | cytosol | 27.47 | 38.6 |
| TraesCS7D01G018500.1 | Wheat | cytosol | 19.63 | 38.04 |
| TraesCS7B01G056900.1 | Wheat | extracellular, plasma membrane | 25.71 | 37.6 |
| TraesCS7D01G018700.1 | Wheat | cytosol | 24.33 | 37.18 |
| TraesCS7D01G001400.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 14.84 | 37.18 |
| TraesCS7D01G122800.1 | Wheat | cytosol | 24.61 | 37.13 |
| HORVU7Hr1G002290.1 | Barley | cytosol | 22.21 | 36.91 |
| TraesCS7D01G017900.1 | Wheat | cytosol | 12.63 | 36.73 |
| TraesCS7D01G123100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 15.02 | 36.38 |
| TraesCS7D01G017400.1 | Wheat | cytosol, extracellular | 20.18 | 36.2 |
| TraesCS7B01G024600.1 | Wheat | cytosol | 20.09 | 35.33 |
| Os05t0380300-01 | Rice | plasma membrane | 40.46 | 34.87 |
| TraesCS7D01G018200.1 | Wheat | cytosol | 27.37 | 34.78 |
| HORVU7Hr1G000890.2 | Barley | cytosol | 28.39 | 34.34 |
| TraesCS7D01G122700.1 | Wheat | cytosol | 32.63 | 34.01 |
| TraesCS3B01G503600.1 | Wheat | extracellular, nucleus, plastid, vacuole | 28.29 | 33.77 |
| TraesCS3B01G497800.1 | Wheat | cytosol | 29.86 | 33.51 |
| TraesCS7D01G017300.1 | Wheat | plasma membrane | 22.58 | 33.33 |
| HORVU7Hr1G026360.1 | Barley | extracellular | 32.9 | 32.99 |
| TraesCS7B01G024900.1 | Wheat | cytosol | 33.09 | 32.97 |
| TraesCS7D01G018000.1 | Wheat | cytosol | 34.65 | 32.61 |
| TraesCS7D01G122900.1 | Wheat | cytosol | 31.8 | 32.52 |
| TraesCS7D01G123300.1 | Wheat | cytosol, mitochondrion, nucleus | 21.84 | 31.98 |
| TraesCS7B01G024700.1 | Wheat | cytosol | 31.71 | 31.94 |
| HORVU7Hr1G002260.2 | Barley | cytosol | 30.51 | 31.86 |
| TraesCS5D01G315800.1 | Wheat | extracellular, golgi, nucleus, plastid | 34.84 | 31.84 |
| OQU80806 | Sorghum | cytosol | 33.92 | 31.83 |
| GSMUA_Achr5P11640_001 | Banana | cytosol | 33.27 | 31.67 |
| HORVU7Hr1G000760.3 | Barley | cytosol | 28.02 | 31.67 |
| OQU80781 | Sorghum | cytosol, extracellular, nucleus | 34.65 | 31.62 |
| TraesCS7D01G017700.1 | Wheat | cytosol | 33.46 | 31.54 |
| Os08t0543500-01 | Rice | cytosol, plastid | 33.27 | 31.31 |
| EES14172 | Sorghum | cytosol | 34.19 | 31.15 |
| TraesCS7D01G123000.1 | Wheat | cytosol, plastid | 33.0 | 30.97 |
| TraesCS5D01G398100.1 | Wheat | cytosol | 34.38 | 30.93 |
| Os08t0543100-00 | Rice | cytosol | 33.64 | 30.83 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 27.47 | 30.69 |
| TraesCS7D01G000900.1 | Wheat | plasma membrane | 31.15 | 30.59 |
| TraesCS7B01G339900.1 | Wheat | plasma membrane | 34.47 | 30.28 |
| TraesCS5D01G031100.1 | Wheat | mitochondrion | 21.47 | 30.03 |
| HORVU5Hr1G006710.5 | Barley | cytosol | 34.93 | 29.91 |
| Os08t0543050-00 | Rice | cytosol, plastid | 33.18 | 29.75 |
| TraesCS7B01G096400.1 | Wheat | cytosol, extracellular, nucleus | 26.64 | 29.7 |
| EES14143 | Sorghum | cytosol | 31.89 | 29.6 |
| Zm00001d031711_P001 | Maize | cytosol | 32.53 | 29.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P17310_001 | EnsemblPlants:GSMUA_Achr9T17310_001 | EnsemblPlantsGene:GSMUA_Achr9G17310_001 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | InterPro:RX-like_CC | PANTHER:PTHR23155 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000295FC50 | UniProt:M0U138 | MapMan:35.1 | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G17310_001]
Coordinates
chr9:-:11839559..11843223
Molecular Weight (calculated)
122436.0 Da
IEP (calculated)
7.231
GRAVY (calculated)
-0.187
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVVEALLSSF LEILIDSTKK SVVRQIGAVW GLEEDLEKLG RTLLRIQSIV GDAEEQQIKD TAVKKWLTAL RDAAYAAEDV LDEFNLEILR KSNRAIENKM
0101: MGKVSDFFSS HNALYFRFKM ARKLNEVVKS IDEIAAESRK FNFAVRTQEQ TPPTVRQTHS YVVESDVIGR GEEKDEIVKL LIEQRDENEK IAVLPIVGMG
0201: GLGKTTLAQL IYQDKRVERH FQLRIWVCVG SVFDLGEILK AIISSATGRQ SDLKFMDMLQ CSVRDVLAGK RYLLVLDDEW NEDSSKWDDL KALLACGGDG
0301: SRVVVTTRSD GVSSMMGTLT THKLAFLSEE DSWDLFRRRA FPSGQDDDKQ QHQNLVEIGK AIVTKCGGLP LAVKALGSML SYQNDEREWS AIKESNIWDT
0401: KVGEGDILPA LLLSYNDLPS HLKRCFAFCA IFPKDYEIEV DMLIRLWMAQ GFIPSEGTAE PGSYLDFWGN IMHAYFRWRD HELEVKGYCN LRTCKMHDLI
0501: HDLAQHISGE EGVALLEPCT ATAPRKDVHH LSLPGTSSSS KIHETLGKFP ALRTLLVRDA YYGKAVDNIS RPAKLRVLGF HNLNATMLQN LARHLKHVRF
0601: LDISYSTIPE LPEAITTLLN LQTLKLSGCQ LLRKLPSKMK NMSNLRHLYL DECPELRDMP EGLGRLSCLH TLSKYIVGVG AGRGIGQLKE LNLSGKLEIY
0701: GLGNVRNAAN AREANLHSKR DLHSLALCWG VVDWTEEESL SENVETRDEN SEALLKALAP PDGIKVLSIW GYGGVRFPTW TSDEQLLSRY QLLVEIHLGG
0801: CRNCQHLPSE QTFPALKRLG KCFPHLVELR ISECSKLGSM PRLPSLKVLG MPSGNRMLLG SIENLSTLAV LCINTDSVTV DGETRSTFPR LRRLYTSDCD
0901: WLFSSRQSMF WKSLVSLHTL TIDSCEDLRT FPEEFQGLKS LKSLFVIDYL CIYKCGGLKK MPRCPTSLKR LNILYCIGLT SLTEDIGQLT SLESLFLDDC
1001: PNLLSLPLEL QQLTMLHRVH IEDCLKLKSL PQDLWQYLSG LQSFTILKCP ILEKQLRKKK KEGRHLVSRI PESTIMEGSK AFSFN
0101: MGKVSDFFSS HNALYFRFKM ARKLNEVVKS IDEIAAESRK FNFAVRTQEQ TPPTVRQTHS YVVESDVIGR GEEKDEIVKL LIEQRDENEK IAVLPIVGMG
0201: GLGKTTLAQL IYQDKRVERH FQLRIWVCVG SVFDLGEILK AIISSATGRQ SDLKFMDMLQ CSVRDVLAGK RYLLVLDDEW NEDSSKWDDL KALLACGGDG
0301: SRVVVTTRSD GVSSMMGTLT THKLAFLSEE DSWDLFRRRA FPSGQDDDKQ QHQNLVEIGK AIVTKCGGLP LAVKALGSML SYQNDEREWS AIKESNIWDT
0401: KVGEGDILPA LLLSYNDLPS HLKRCFAFCA IFPKDYEIEV DMLIRLWMAQ GFIPSEGTAE PGSYLDFWGN IMHAYFRWRD HELEVKGYCN LRTCKMHDLI
0501: HDLAQHISGE EGVALLEPCT ATAPRKDVHH LSLPGTSSSS KIHETLGKFP ALRTLLVRDA YYGKAVDNIS RPAKLRVLGF HNLNATMLQN LARHLKHVRF
0601: LDISYSTIPE LPEAITTLLN LQTLKLSGCQ LLRKLPSKMK NMSNLRHLYL DECPELRDMP EGLGRLSCLH TLSKYIVGVG AGRGIGQLKE LNLSGKLEIY
0701: GLGNVRNAAN AREANLHSKR DLHSLALCWG VVDWTEEESL SENVETRDEN SEALLKALAP PDGIKVLSIW GYGGVRFPTW TSDEQLLSRY QLLVEIHLGG
0801: CRNCQHLPSE QTFPALKRLG KCFPHLVELR ISECSKLGSM PRLPSLKVLG MPSGNRMLLG SIENLSTLAV LCINTDSVTV DGETRSTFPR LRRLYTSDCD
0901: WLFSSRQSMF WKSLVSLHTL TIDSCEDLRT FPEEFQGLKS LKSLFVIDYL CIYKCGGLKK MPRCPTSLKR LNILYCIGLT SLTEDIGQLT SLESLFLDDC
1001: PNLLSLPLEL QQLTMLHRVH IEDCLKLKSL PQDLWQYLSG LQSFTILKCP ILEKQLRKKK KEGRHLVSRI PESTIMEGSK AFSFN
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.