Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU7Hr1G000950.1 | Barley | cytosol | 16.84 | 35.36 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 29.91 | 35.12 |
Os08t0542200-01 | Rice | cytosol | 14.91 | 34.98 |
TraesCS7D01G018400.1 | Wheat | cytosol | 9.74 | 34.58 |
TraesCS5B01G034600.1 | Wheat | cytosol | 13.68 | 34.44 |
HORVU7Hr1G002290.1 | Barley | cytosol | 19.39 | 33.84 |
VIT_19s0027g01170.t01 | Wine grape | cytosol | 25.44 | 33.3 |
VIT_19s0027g00660.t01 | Wine grape | cytosol | 24.12 | 33.29 |
GSMUA_Achr9P17310_001 | Banana | cytosol | 31.67 | 33.27 |
TraesCS7D01G017600.1 | Wheat | cytosol | 22.28 | 32.9 |
TraesCS5B01G034500.1 | Wheat | cytosol | 13.25 | 32.9 |
TraesCS7B01G024800.1 | Wheat | cytosol, plastid | 11.58 | 32.84 |
TraesCS7D01G122800.1 | Wheat | cytosol | 20.7 | 32.82 |
TraesCS7D01G018700.1 | Wheat | cytosol | 20.35 | 32.68 |
KRH62859 | Soybean | cytosol, extracellular | 24.74 | 32.6 |
TraesCS7D01G018200.1 | Wheat | cytosol | 24.39 | 32.55 |
VIT_13s0084g00060.t01 | Wine grape | cytosol | 28.86 | 32.51 |
TraesCS5B01G309200.1 | Wheat | cytosol | 12.54 | 32.5 |
TraesCS7D01G017900.1 | Wheat | cytosol | 10.61 | 32.44 |
HORVU7Hr1G000890.2 | Barley | cytosol | 25.44 | 32.33 |
TraesCS7D01G018500.1 | Wheat | cytosol | 15.88 | 32.32 |
TraesCS7D01G001400.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 12.19 | 32.1 |
TraesCS3B01G503600.1 | Wheat | extracellular, nucleus, plastid, vacuole | 25.44 | 31.9 |
PGSC0003DMT400017461 | Potato | cytosol | 32.11 | 31.5 |
TraesCS7B01G024600.1 | Wheat | cytosol | 16.84 | 31.12 |
TraesCS7D01G017400.1 | Wheat | cytosol, extracellular | 16.49 | 31.07 |
TraesCS7B01G056900.1 | Wheat | extracellular, plasma membrane | 20.18 | 31.0 |
PGSC0003DMT400044170 | Potato | cytosol | 29.3 | 30.53 |
TraesCS3B01G497800.1 | Wheat | cytosol | 25.44 | 29.99 |
TraesCS7D01G123100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 11.75 | 29.91 |
VIT_19s0027g01350.t01 | Wine grape | cytosol | 30.7 | 29.84 |
TraesCS7D01G123300.1 | Wheat | cytosol, mitochondrion, nucleus | 19.39 | 29.82 |
Os08t0543100-00 | Rice | cytosol | 30.96 | 29.81 |
TraesCS7D01G122900.1 | Wheat | cytosol | 27.72 | 29.78 |
TraesCS7D01G122700.1 | Wheat | cytosol | 27.19 | 29.78 |
OQU80806 | Sorghum | cytosol | 30.09 | 29.67 |
TraesCS7B01G024700.1 | Wheat | cytosol | 27.81 | 29.43 |
HORVU7Hr1G000760.3 | Barley | cytosol | 24.65 | 29.27 |
TraesCS7D01G017300.1 | Wheat | plasma membrane | 18.86 | 29.25 |
HORVU7Hr1G002260.2 | Barley | cytosol | 26.58 | 29.16 |
Os08t0543500-01 | Rice | cytosol, plastid | 29.47 | 29.14 |
EES14172 | Sorghum | cytosol | 30.35 | 29.05 |
TraesCS7D01G017700.1 | Wheat | cytosol | 29.3 | 29.02 |
HORVU7Hr1G026360.1 | Barley | extracellular | 27.37 | 28.84 |
TraesCS7D01G000900.1 | Wheat | plasma membrane | 27.89 | 28.78 |
TraesCS7B01G024900.1 | Wheat | cytosol | 27.37 | 28.65 |
TraesCS5D01G315800.1 | Wheat | extracellular, golgi, nucleus, plastid | 29.82 | 28.64 |
Os08t0543050-00 | Rice | cytosol, plastid | 30.26 | 28.51 |
TraesCS7D01G018000.1 | Wheat | cytosol | 28.77 | 28.45 |
EES14143 | Sorghum | cytosol | 28.95 | 28.23 |
TraesCS5D01G398100.1 | Wheat | cytosol | 29.74 | 28.11 |
TraesCS7D01G123000.1 | Wheat | cytosol, plastid | 28.42 | 28.03 |
OQU80781 | Sorghum | cytosol, extracellular, nucleus | 29.12 | 27.92 |
Zm00001d031711_P001 | Maize | cytosol | 28.86 | 27.53 |
TraesCS7B01G096400.1 | Wheat | cytosol, extracellular, nucleus | 23.33 | 27.34 |
Os05t0380300-01 | Rice | plasma membrane | 30.18 | 27.32 |
TraesCS5D01G031100.1 | Wheat | mitochondrion | 18.33 | 26.93 |
HORVU5Hr1G006710.5 | Barley | cytosol | 29.47 | 26.52 |
TraesCS7B01G339900.1 | Wheat | plasma membrane | 28.33 | 26.15 |
Protein Annotations
Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr5G11640_001 | EnsemblPlants:GSMUA_Achr5P11640_001 | EnsemblPlants:GSMUA_Achr5T11640_001 |
InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | InterPro:Leu-rich_rpt_typical-subtyp |
UniProt:M0SXP3 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 |
SMART:SM00367 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002967F84 | SEG:seg |
Description
Putative disease resistance protein RGA4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G11640_001]
Coordinates
chr5:-:8316390..8319812
Molecular Weight (calculated)
128536.0 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.151
Length
1140 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPALTATAV RFAVDKLVTL LEEQYKAVSG VQGKLKILES LHEQIDNVLE DAESRPLMDH AVKPLLLKLG DMACNIEDVL DLFDAEAKRR TSGARLCMTV
0101: RDFFSPDNQV RFRFKMSRSI EAVTTRLNSI LVEKTLLLSL AQGTSKRQAG GEDRPVTRSQ NAFRDVGRGR ETEEIVNLLI DHESKETISV IAIVGMAGLG
0201: KTTLAQLVFN DDRVKFHFSL TMWKDVGHDF NPTKLMESIL GLAAGNPINI SETDLVQREL RRALAGKRFL LVLDNVWNDD QLKWEELRVL LQEYGAKGSK
0301: IVVTTRSLKV SSIMGSSTPH RLQPLSDDAC WSLFRIFAFE DREERHSLVE IGKEIVKKCG GVPLAAITLG SLLRFKRDED DWFSVLNTEI WQLEEDEDRI
0401: MAALRLSYDD LDRRSKQCFA FCSLFPKNSQ METENLVQLW VANGIIRPGR GSDVESIGND VFRDLLLRSF FQEWKKDVDG HVTSCKMHDL MHDLARSVAG
0501: DECCNLGHDQ VNHIQSRTRH LFMDQLASSS VSEALCKPES LRTLLSQKDH LTDADGLRCI FSKLKLLRVL DLAASDIKKV PESVGKLIHL RYLNLSKTSI
0601: AELPCSITLL QNLQYLILSR SKLRELPKNL SSMQSLRHLD ISGCPFLTHM PRRFSRLTSL QRLSNYIVGK RDGCSIRELK DLDLHGDINI EFYVNVSNDS
0701: CAGQKILNNK QHLKSLRLHW DDASSDHNVE NLLDDLCPHA RLKRLSISKY GGVKLPTWLA DSQIPNLVEV KLINCRNCER IPQFGNLKFL TELQVNGMES
0801: VSRIHADFYG HGEVQGFPSL KQFSLYNMPN LEEWSGTEGL ELFPRLHTLT IGECPKLMAI PRLQRIERLE MQKCNGSLLS SLGALTSLSS LLVDRILGVT
0901: FPVGLFQNLA SLRRLNITDC TELESLPVDE MQHLTALQHL TISGCKNLRS FPLNVERLRA LQSLNLRYCI NLGSLPEGLH SLTSLRSLRV VSCRSVTTQP
1001: EVIIRSLNSV RELFEAEICC SKVNLSGRLQ DLGTLRMLRI FGGHSMRPVS ATVLAATTLS ICCCEELSSL MARTPSGVLE DVAIEDCSSL TALPDWLTEL
1101: RSLRYLSIHN CPELESLPRV LLDLRPRQGL WIEGCPRLQI
0101: RDFFSPDNQV RFRFKMSRSI EAVTTRLNSI LVEKTLLLSL AQGTSKRQAG GEDRPVTRSQ NAFRDVGRGR ETEEIVNLLI DHESKETISV IAIVGMAGLG
0201: KTTLAQLVFN DDRVKFHFSL TMWKDVGHDF NPTKLMESIL GLAAGNPINI SETDLVQREL RRALAGKRFL LVLDNVWNDD QLKWEELRVL LQEYGAKGSK
0301: IVVTTRSLKV SSIMGSSTPH RLQPLSDDAC WSLFRIFAFE DREERHSLVE IGKEIVKKCG GVPLAAITLG SLLRFKRDED DWFSVLNTEI WQLEEDEDRI
0401: MAALRLSYDD LDRRSKQCFA FCSLFPKNSQ METENLVQLW VANGIIRPGR GSDVESIGND VFRDLLLRSF FQEWKKDVDG HVTSCKMHDL MHDLARSVAG
0501: DECCNLGHDQ VNHIQSRTRH LFMDQLASSS VSEALCKPES LRTLLSQKDH LTDADGLRCI FSKLKLLRVL DLAASDIKKV PESVGKLIHL RYLNLSKTSI
0601: AELPCSITLL QNLQYLILSR SKLRELPKNL SSMQSLRHLD ISGCPFLTHM PRRFSRLTSL QRLSNYIVGK RDGCSIRELK DLDLHGDINI EFYVNVSNDS
0701: CAGQKILNNK QHLKSLRLHW DDASSDHNVE NLLDDLCPHA RLKRLSISKY GGVKLPTWLA DSQIPNLVEV KLINCRNCER IPQFGNLKFL TELQVNGMES
0801: VSRIHADFYG HGEVQGFPSL KQFSLYNMPN LEEWSGTEGL ELFPRLHTLT IGECPKLMAI PRLQRIERLE MQKCNGSLLS SLGALTSLSS LLVDRILGVT
0901: FPVGLFQNLA SLRRLNITDC TELESLPVDE MQHLTALQHL TISGCKNLRS FPLNVERLRA LQSLNLRYCI NLGSLPEGLH SLTSLRSLRV VSCRSVTTQP
1001: EVIIRSLNSV RELFEAEICC SKVNLSGRLQ DLGTLRMLRI FGGHSMRPVS ATVLAATTLS ICCCEELSSL MARTPSGVLE DVAIEDCSSL TALPDWLTEL
1101: RSLRYLSIHN CPELESLPRV LLDLRPRQGL WIEGCPRLQI
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.