Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017461 | Potato | cytosol | 44.61 | 42.0 |
| PGSC0003DMT400024060 | Potato | cytosol | 15.36 | 40.48 |
| KRH62859 | Soybean | cytosol, extracellular | 30.53 | 38.61 |
| PGSC0003DMT400050981 | Potato | cytosol | 12.89 | 38.42 |
| VIT_19s0027g01170.t01 | Wine grape | cytosol | 29.62 | 37.2 |
| PGSC0003DMT400024057 | Potato | vacuole | 22.76 | 35.88 |
| PGSC0003DMT400046505 | Potato | plasma membrane | 22.85 | 35.66 |
| PGSC0003DMT400051008 | Potato | cytosol | 10.33 | 35.31 |
| PGSC0003DMT400051007 | Potato | cytosol | 14.44 | 34.57 |
| TraesCS5B01G034600.1 | Wheat | cytosol | 14.17 | 34.22 |
| Os08t0542200-01 | Rice | cytosol | 15.17 | 34.16 |
| TraesCS5B01G309200.1 | Wheat | cytosol | 13.44 | 33.41 |
| TraesCS7D01G122800.1 | Wheat | cytosol | 21.94 | 33.38 |
| TraesCS7B01G024800.1 | Wheat | cytosol, plastid | 12.25 | 33.33 |
| TraesCS7D01G018400.1 | Wheat | cytosol | 9.78 | 33.33 |
| VIT_19s0027g00660.t01 | Wine grape | cytosol | 24.95 | 33.05 |
| PGSC0003DMT400043963 | Potato | endoplasmic reticulum, plasma membrane | 29.25 | 32.75 |
| TraesCS7D01G017900.1 | Wheat | cytosol | 11.15 | 32.71 |
| PGSC0003DMT400024123 | Potato | plasma membrane | 29.34 | 32.49 |
| PGSC0003DMT400076092 | Potato | cytosol | 23.03 | 32.47 |
| HORVU7Hr1G002290.1 | Barley | cytosol | 19.29 | 32.31 |
| VIT_13s0084g00060.t01 | Wine grape | cytosol | 29.89 | 32.31 |
| TraesCS5B01G034500.1 | Wheat | cytosol | 13.53 | 32.24 |
| PGSC0003DMT400022135 | Potato | cytosol, plasma membrane | 30.35 | 32.23 |
| VIT_19s0027g01350.t01 | Wine grape | cytosol | 34.37 | 32.05 |
| PGSC0003DMT400028879 | Potato | extracellular | 9.87 | 31.95 |
| TraesCS7D01G001400.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 12.61 | 31.87 |
| TraesCS7D01G018700.1 | Wheat | cytosol | 20.57 | 31.69 |
| PGSC0003DMT400011307 | Potato | cytosol | 11.7 | 31.6 |
| TraesCS7D01G017600.1 | Wheat | cytosol | 22.21 | 31.48 |
| PGSC0003DMT400021607 | Potato | cytosol | 13.62 | 31.43 |
| PGSC0003DMT400043956 | Potato | cytosol | 28.43 | 31.41 |
| PGSC0003DMT400028417 | Potato | cytosol, golgi, plastid | 10.51 | 31.34 |
| PGSC0003DMT400079343 | Potato | cytosol | 18.19 | 31.29 |
| PGSC0003DMT400079272 | Potato | cytosol, plasma membrane | 28.25 | 31.06 |
| PGSC0003DMT400017408 | Potato | cytosol | 31.54 | 31.05 |
| TraesCS7D01G123100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 12.71 | 31.03 |
| HORVU7Hr1G000950.1 | Barley | cytosol | 15.36 | 30.94 |
| PGSC0003DMT400019688 | Potato | cytosol, plasma membrane, plastid | 17.82 | 30.81 |
| TraesCS7D01G018500.1 | Wheat | cytosol | 15.54 | 30.36 |
| PGSC0003DMT400079342 | Potato | cytosol | 19.93 | 30.15 |
| TraesCS7B01G024600.1 | Wheat | cytosol | 17.0 | 30.15 |
| PGSC0003DMT400028882 | Potato | cytosol | 7.77 | 30.14 |
| PGSC0003DMT400012963 | Potato | cytosol | 31.26 | 30.03 |
| TraesCS7B01G056900.1 | Wheat | extracellular, plasma membrane | 20.2 | 29.78 |
| PGSC0003DMT400028851 | Potato | cytosol | 11.24 | 29.78 |
| TraesCS7D01G017400.1 | Wheat | cytosol, extracellular | 16.27 | 29.42 |
| PGSC0003DMT400024063 | Potato | cytosol | 14.35 | 29.35 |
| GSMUA_Achr5P11640_001 | Banana | cytosol | 30.53 | 29.3 |
| TraesCS7D01G018200.1 | Wheat | cytosol | 22.76 | 29.16 |
| PGSC0003DMT400049255 | Potato | cytosol | 24.5 | 29.07 |
| PGSC0003DMT400021294 | Potato | cytosol | 16.0 | 29.02 |
| TraesCS3B01G503600.1 | Wheat | extracellular, nucleus, plastid, vacuole | 23.86 | 28.71 |
| PGSC0003DMT400014280 | Potato | extracellular, plasma membrane | 10.88 | 28.67 |
| PGSC0003DMT400051247 | Potato | extracellular, plasma membrane | 14.9 | 28.6 |
| HORVU7Hr1G000890.2 | Barley | cytosol | 23.22 | 28.32 |
| PGSC0003DMT400008029 | Potato | cytosol | 30.44 | 28.27 |
| TraesCS7D01G017300.1 | Wheat | plasma membrane | 18.65 | 27.76 |
| PGSC0003DMT400028871 | Potato | cytosol | 11.43 | 27.47 |
| HORVU7Hr1G000760.3 | Barley | cytosol | 23.95 | 27.29 |
| PGSC0003DMT400021631 | Potato | cytosol | 25.32 | 27.21 |
| TraesCS7D01G122700.1 | Wheat | cytosol | 25.78 | 27.09 |
| HORVU7Hr1G026360.1 | Barley | extracellular | 26.6 | 26.89 |
| PGSC0003DMT400006336 | Potato | cytosol | 13.44 | 26.78 |
| PGSC0003DMT400054250 | Potato | cytosol | 13.8 | 26.73 |
| TraesCS7D01G122900.1 | Wheat | cytosol | 25.87 | 26.67 |
| TraesCS3B01G497800.1 | Wheat | cytosol | 23.4 | 26.47 |
| Os05t0380300-01 | Rice | plasma membrane | 30.44 | 26.45 |
| TraesCS7B01G024900.1 | Wheat | cytosol | 26.23 | 26.35 |
| TraesCS7B01G024700.1 | Wheat | cytosol | 25.87 | 26.28 |
| HORVU7Hr1G002260.2 | Barley | cytosol | 24.86 | 26.18 |
| TraesCS7D01G017700.1 | Wheat | cytosol | 27.24 | 25.89 |
| TraesCS7D01G123000.1 | Wheat | cytosol, plastid | 27.24 | 25.78 |
| TraesCS5D01G315800.1 | Wheat | extracellular, golgi, nucleus, plastid | 27.51 | 25.36 |
| TraesCS7D01G018000.1 | Wheat | cytosol | 26.69 | 25.33 |
| TraesCS7D01G123300.1 | Wheat | cytosol, mitochondrion, nucleus | 17.0 | 25.1 |
| Os08t0543100-00 | Rice | cytosol | 27.06 | 25.0 |
| OQU80806 | Sorghum | cytosol | 26.33 | 24.91 |
| OQU80781 | Sorghum | cytosol, extracellular, nucleus | 26.97 | 24.81 |
| TraesCS7D01G000900.1 | Wheat | plasma membrane | 24.86 | 24.62 |
| Os08t0543500-01 | Rice | cytosol, plastid | 25.78 | 24.46 |
| PGSC0003DMT400022156 | Potato | cytosol | 28.25 | 24.41 |
| PGSC0003DMT400008852 | Potato | mitochondrion | 8.32 | 24.4 |
| TraesCS7B01G096400.1 | Wheat | cytosol, extracellular, nucleus | 21.66 | 24.36 |
| EES14172 | Sorghum | cytosol | 26.23 | 24.1 |
| EES14143 | Sorghum | cytosol | 25.69 | 24.04 |
| PGSC0003DMT400049984 | Potato | cytosol | 26.78 | 24.04 |
| TraesCS5D01G398100.1 | Wheat | cytosol | 26.33 | 23.88 |
| PGSC0003DMT400011301 | Potato | cytosol | 27.61 | 23.84 |
| Zm00001d031711_P001 | Maize | cytosol | 25.96 | 23.77 |
| PGSC0003DMT400022154 | Potato | cytosol | 26.87 | 23.75 |
| PGSC0003DMT400021634 | Potato | cytosol | 27.42 | 23.57 |
| Os08t0543050-00 | Rice | cytosol, plastid | 26.05 | 23.55 |
| HORVU5Hr1G006710.5 | Barley | cytosol | 27.24 | 23.52 |
| PGSC0003DMT400028691 | Potato | cytosol | 27.51 | 23.33 |
| PGSC0003DMT400071966 | Potato | nucleus | 26.33 | 23.21 |
| PGSC0003DMT400033635 | Potato | extracellular, plasma membrane, plastid | 26.6 | 23.21 |
| PGSC0003DMT400056053 | Potato | cytosol | 23.58 | 23.2 |
| TraesCS7B01G339900.1 | Wheat | plasma membrane | 26.14 | 23.16 |
| PGSC0003DMT400043990 | Potato | cytosol | 7.86 | 22.81 |
| TraesCS5D01G031100.1 | Wheat | mitochondrion | 15.45 | 21.78 |
| PGSC0003DMT400065971 | Potato | cytosol | 19.01 | 21.62 |
| PGSC0003DMT400028843 | Potato | cytosol | 14.17 | 19.57 |
| PGSC0003DMT400079273 | Potato | extracellular, plasma membrane | 13.53 | 18.2 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0043531 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | UniProt:M1BFQ3 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | EnsemblPlantsGene:PGSC0003DMG400017146 |
| PGSC:PGSC0003DMG400017146 | EnsemblPlants:PGSC0003DMT400044170 | PRINTS:PR00364 | PANTHER:PTHR23155 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI000295035F | SEG:seg | : | : | : |
Description
NBS-LRR resistance protein RGH1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017146]
Coordinates
chr9:-:56988249..56993036
Molecular Weight (calculated)
124732.0 Da
IEP (calculated)
6.992
GRAVY (calculated)
-0.071
Length
1094 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAETILYKLA AEILKSLGSL AAQQVGSIYG VANELHKLST TVSSIQAVLT DAEKQQGSSH QDWIMRLKKV FFEADDLLDD FATEVTRRKL VNKAGIFFSK
0101: SNPVLYNLKI SHRLKAIRQN LDLIAKDKAS LDLVEMRQPL LLEPNSVQLN LDRETYSFVP DGEVIGRNAD KKEIVDFLLD SEVEENVVVI SIVGLGGLGK
0201: TTLAQWVYND EMVKVNFDKR LWVCVSDVFE VKMIAEKIIE SAGGEKANYL QLNTVQNELT EMLDGKKYLL VLDDVWNENT LKWSKLKNML IGGAKGSKIL
0301: VTTRSDVVAE VSGSVHQHKL GDLSEEEAWT LFEKMAFECN KESENSNLVE IGKEIVRKCG GVPLAIKSVG SLLRLKRTEN EWIYFKNQDL SSITRGSNDV
0401: MAILRLSYNH LPQHLKICFA YCSLFPKDFN IQSFDLIDMW IAQGFIQSTI SNRDNVEDVA NSYFMDLLRR SFFQETEEHE LFLLFQGTEK HEFLHFYKMH
0501: DLIHDLAKEV ADREFFSITK TEDTEVVPEQ TLHASCLFQI DGSLVFPSDF YRKHIKLRTF IYLNGSPYSV MSNSTLERMI SSFERLRILH LCQLQIELLP
0601: QSLGGLKHLR YLAISSESIV TLPNSITKLH NLQILKLVNC NKLTKLPRDI WRLVSLRRLV CRFCRSLTHI PPGLWQLASL MHLDFNYCLS LEDMPGIGQL
0701: TSLRTLTDFI IGKESCKSGL ASDRLNELKG LDLRNRLTIN FKGRVHAIGE ITLTDVVKKM KHLRQLNVEF EFGNYEDYDL IMLEALQPHH NIESLRIVNY
0801: SGSRFPSWLM VENLGFLLPK LVYLRIEYSR KCQKLPPLWK LPSLQSLVLR NLNVVANIDG LEGDDKFMLP SDECYFSSLK RLELQAINKK IMKQILCPPH
0901: HHSPLCDLNN LTLRSVVSLV TMPEDVLKSL VSLQSLSIQS CRNLVSLSTC LTHLSSLEHL WIDNCPQLDL SSDEAMQFQA PGNLSTFIVL RLDKLTTLPV
1001: WLQHFSGTLK SINIRICPNF ATIPEWIGGL ISLNQLRIHG SPMLTSLPEG MRSLAALQML IVIRGSSILK QRCQEEVGED WPKIAHIPRV YIQE
0101: SNPVLYNLKI SHRLKAIRQN LDLIAKDKAS LDLVEMRQPL LLEPNSVQLN LDRETYSFVP DGEVIGRNAD KKEIVDFLLD SEVEENVVVI SIVGLGGLGK
0201: TTLAQWVYND EMVKVNFDKR LWVCVSDVFE VKMIAEKIIE SAGGEKANYL QLNTVQNELT EMLDGKKYLL VLDDVWNENT LKWSKLKNML IGGAKGSKIL
0301: VTTRSDVVAE VSGSVHQHKL GDLSEEEAWT LFEKMAFECN KESENSNLVE IGKEIVRKCG GVPLAIKSVG SLLRLKRTEN EWIYFKNQDL SSITRGSNDV
0401: MAILRLSYNH LPQHLKICFA YCSLFPKDFN IQSFDLIDMW IAQGFIQSTI SNRDNVEDVA NSYFMDLLRR SFFQETEEHE LFLLFQGTEK HEFLHFYKMH
0501: DLIHDLAKEV ADREFFSITK TEDTEVVPEQ TLHASCLFQI DGSLVFPSDF YRKHIKLRTF IYLNGSPYSV MSNSTLERMI SSFERLRILH LCQLQIELLP
0601: QSLGGLKHLR YLAISSESIV TLPNSITKLH NLQILKLVNC NKLTKLPRDI WRLVSLRRLV CRFCRSLTHI PPGLWQLASL MHLDFNYCLS LEDMPGIGQL
0701: TSLRTLTDFI IGKESCKSGL ASDRLNELKG LDLRNRLTIN FKGRVHAIGE ITLTDVVKKM KHLRQLNVEF EFGNYEDYDL IMLEALQPHH NIESLRIVNY
0801: SGSRFPSWLM VENLGFLLPK LVYLRIEYSR KCQKLPPLWK LPSLQSLVLR NLNVVANIDG LEGDDKFMLP SDECYFSSLK RLELQAINKK IMKQILCPPH
0901: HHSPLCDLNN LTLRSVVSLV TMPEDVLKSL VSLQSLSIQS CRNLVSLSTC LTHLSSLEHL WIDNCPQLDL SSDEAMQFQA PGNLSTFIVL RLDKLTTLPV
1001: WLQHFSGTLK SINIRICPNF ATIPEWIGGL ISLNQLRIHG SPMLTSLPEG MRSLAALQML IVIRGSSILK QRCQEEVGED WPKIAHIPRV YIQE
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.