Factsheet for PGSC0003DMT400022154

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	24.31	82.02
PGSC0003DMT400028851	Potato	cytosol	26.74	80.15
PGSC0003DMT400021607	Potato	cytosol	29.97	78.27
PGSC0003DMT400028882	Potato	cytosol	17.69	77.66
PGSC0003DMT400028879	Potato	extracellular	21.16	77.51
PGSC0003DMT400021294	Potato	cytosol	37.72	77.45
PGSC0003DMT400021631	Potato	cytosol	63.65	77.41
PGSC0003DMT400049255	Potato	cytosol	57.59	77.33
PGSC0003DMT400011307	Potato	cytosol	25.2	77.04
PGSC0003DMT400022156	Potato	cytosol	76.74	75.04
PGSC0003DMT400056053	Potato	cytosol	67.37	75.0
PGSC0003DMT400071966	Potato	nucleus	74.39	74.21
PGSC0003DMT400011301	Potato	cytosol	75.53	73.8
PGSC0003DMT400049984	Potato	cytosol	71.65	72.76
PGSC0003DMT400028691	Potato	cytosol	75.69	72.64
PGSC0003DMT400021634	Potato	cytosol	73.42	71.41
PGSC0003DMT400028843	Potato	cytosol	45.4	70.96
PGSC0003DMT400065971	Potato	cytosol	55.09	70.89
PGSC0003DMT400028871	Potato	cytosol	23.26	63.3
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	41.84	41.31
PGSC0003DMT400024060	Potato	cytosol	11.95	35.66
PGSC0003DMT400051007	Potato	cytosol	12.84	34.79
PGSC0003DMT400050981	Potato	cytosol	10.26	34.6
Os08t0542200-01	Rice	cytosol	13.33	33.95
PGSC0003DMT400046505	Potato	plasma membrane	18.98	33.52
PGSC0003DMT400024123	Potato	plasma membrane	26.25	32.89
PGSC0003DMT400076092	Potato	cytosol	20.6	32.86
PGSC0003DMT400024057	Potato	vacuole	18.17	32.42
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	26.9	32.33
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	10.74	32.05
TraesCS5B01G034600.1	Wheat	cytosol	11.63	31.79
HORVU7Hr1G002290.1	Barley	cytosol	16.72	31.7
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	24.96	31.63
PGSC0003DMT400043956	Potato	cytosol	25.2	31.52
PGSC0003DMT400079343	Potato	cytosol	15.91	30.97
TraesCS7D01G017600.1	Wheat	cytosol	19.31	30.96
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	14.22	30.88
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	15.75	30.81
PGSC0003DMT400054250	Potato	cytosol	14.05	30.8
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	24.72	30.75
HORVU7Hr1G000950.1	Barley	cytosol	13.41	30.57
PGSC0003DMT400017408	Potato	cytosol	27.38	30.51
PGSC0003DMT400006336	Potato	cytosol	13.49	30.42
PGSC0003DMT400051008	Potato	cytosol	7.84	30.31
TraesCS7D01G018700.1	Wheat	cytosol	17.37	30.28
PGSC0003DMT400008029	Potato	cytosol	28.76	30.22
PGSC0003DMT400079342	Potato	cytosol	17.61	30.15
TraesCS7D01G018200.1	Wheat	cytosol	20.76	30.09
TraesCS5B01G034500.1	Wheat	cytosol	11.15	30.07
TraesCS7D01G122800.1	Wheat	cytosol	17.45	30.04
PGSC0003DMT400017461	Potato	cytosol	28.19	30.03
TraesCS5B01G309200.1	Wheat	cytosol	10.58	29.77
TraesCS7D01G018500.1	Wheat	cytosol	13.41	29.64
PGSC0003DMT400008852	Potato	mitochondrion	8.89	29.49
HORVU7Hr1G000890.2	Barley	cytosol	21.16	29.21
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	17.45	29.15
TraesCS7B01G024800.1	Wheat	cytosol, plastid	9.37	28.86
TraesCS7A01G535400.1	Wheat	plasma membrane	21.32	28.82
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	13.97	28.59
TraesCS7D01G017900.1	Wheat	cytosol	8.56	28.42
PGSC0003DMT400024063	Potato	cytosol	12.28	28.41
PGSC0003DMT400043990	Potato	cytosol	8.64	28.38
TraesCS7B01G024600.1	Wheat	cytosol	14.14	28.36
PGSC0003DMT400012963	Potato	cytosol	25.93	28.18
TraesCS7D01G018400.1	Wheat	cytosol	7.27	28.04
TraesCS7D01G122700.1	Wheat	cytosol	23.51	27.95
TraesCS7D01G122900.1	Wheat	cytosol	23.83	27.8
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	26.66	27.8
TraesCS7B01G024700.1	Wheat	cytosol	24.07	27.67
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	20.19	27.5
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	9.61	27.48
TraesCS3B01G497800.1	Wheat	cytosol	21.41	27.4
OQU80806	Sorghum	cytosol	25.52	27.34
Os08t0543500-01	Rice	cytosol, plastid	25.36	27.23
Os08t0543050-00	Rice	cytosol, plastid	26.49	27.11
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	16.24	27.09
TraesCS7B01G024900.1	Wheat	cytosol	23.75	27.0
HORVU7Hr1G026360.1	Barley	extracellular	23.59	26.99
Os08t0543100-00	Rice	cytosol	25.77	26.94
PGSC0003DMT400044170	Potato	cytosol	23.75	26.87
EES14172	Sorghum	cytosol	25.85	26.87
HORVU7Hr1G002260.2	Barley	cytosol	22.54	26.85
OQU80781	Sorghum	cytosol, extracellular, nucleus	25.77	26.83
TraesCS7D01G017300.1	Wheat	plasma membrane	15.91	26.8
Os05t0380300-01	Rice	plasma membrane	27.06	26.61
TraesCS5D01G031100.1	Wheat	mitochondrion	16.48	26.29
TraesCS7D01G017700.1	Wheat	cytosol	24.39	26.24
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	9.37	25.89
EES14143	Sorghum	cytosol	24.39	25.83
TraesCS7D01G123000.1	Wheat	cytosol, plastid	24.07	25.78
TraesCS7D01G018000.1	Wheat	cytosol	23.99	25.76
HORVU7Hr1G000760.3	Barley	cytosol	19.87	25.62
TraesCS7D01G000900.1	Wheat	plasma membrane	22.78	25.52
TraesCS5D01G398100.1	Wheat	cytosol	24.72	25.37
Zm00001d031711_P001	Maize	cytosol	24.39	25.27
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	19.71	25.08
HORVU5Hr1G006710.5	Barley	cytosol	25.36	24.78
TraesCS7B01G339900.1	Wheat	plasma membrane	23.83	23.89
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	14.14	21.53
TraesCS7A01G535300.1	Wheat	cytosol	2.1	16.77

Protein Annotations

EntrezGene:102604848	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M1AGA2	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400008595	PGSC:PGSC0003DMG400008595	EnsemblPlants:PGSC0003DMT400022154	PRINTS:PR00364	PANTHER:PTHR23155
PANTHER:PTHR23155:SF877	InterPro:RX-like_CC	SMART:SM00367	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295569E
RefSeq:XP_015160818.1	RefSeq:XP_015160819.1	SEG:seg	:	:	:

Description

Cc-nbs-lrr resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008595]

Coordinates

chr10:+:52690613..52695919

Molecular Weight (calculated)

140968.0 Da

IEP (calculated)

6.898

GRAVY (calculated)

-0.128

Length

1238 amino acids

Sequence
(BLAST)

0001: MADPVIGATV QVVLEKLLSL TIEEVKSLRN CKKDLEMLAK NVSLIQAFIH DAERRQVEDQ AVEQWLKMLE RVAEDAENVF DEFRYESLKR QVKIRNNPMK
0101: KVSDFFSHTD FKRKMSRKIN NINEESRAIN KLANDLGLQS LMVPPRQILP IRETDSVVVD VVGRDKDVAE IKEKILTMRD DTDLCTIPIV GMGGLGKTTV
0201: AKRIFNDEQI EKHFEKRVWL CLPEMSETKS FLELILESLT ERKLEVQSRD VIVKKLRDEL AGRKYLLVLD DLWRVDPTLW HEFLDTLKGI NTTRGNCILV
0301: TTRMKLVAST VAVGLHMLGK LADDHCWSIF KQRAFVDGEV PEEMVITENR IVEMCQGLPL AASVLGGLIR NKEKHEWQAI LDSNSLVAHE DDLGENSIKK
0401: ILKLSYVYLP SPHLKKCFAY FAMFPKDFEF EKDQLIQLWM AEGFLHPCQE TIVMEDVGHK FFQILLQNSL LQDVKLDEHN VITHCKMHDL VHDLAGDILK
0501: SKLFDPKGDV GEMSSQVRYF GLDSPIDQID KINEPGRLCA LFSRSNIPND VLFSFQFLRV LNLSRSGIKE LSASIGKLIY LRYLDLSYSG IKALPNSICK
0601: LYNMQTLRVS KCFLLKGLPD EMAHMISLRH VYYNSLCMDN KHFQMPFNMG KLTCLQTLQF FKVGLEKGCR IEEIGHLKNL RGELMIGGLQ LLCNREEART
0701: AYLQEKPKIY KLKYVWSHDE PEGCETSDEY VLDGLQPHPN LKTLAVVDYL GTRFPSWFSE ELLPNLVKLK LSGCKRCKEI PSLGQLKFLQ HLELVGFHKV
0801: ECIGPTFYGI DGNNNGSSSN NANIQVFPLL KELLLEDMPS LTEWKEVQLL PKGNVGRDRL GVRMFPVLKK LTIRNCPLLK STPNQFETLR ELSIEGVDSE
0901: IPLLNLCSNL TSLVMLIIRD VKQLTCLTDE ILCNNFSLEH LLVLNCGEFR ELPQSLYNLR SLKSLSIGDC TNFSSIPVSR GVNHLTSLLK LRLYNCDGLT
1001: SLSSGLLEHC RSLESLNVNK CNNLVSLPLH VWEMPSLSYL NISKCPKLGS VPAGSLHRLT GLRTLHIGPF SELVDFEAFQ LIFNGIQQLS SLCVLWVYGH
1101: AHWDSLPYQL LEFSSVTEIG ITDFGIKSFP IETLELVSCK QLQHLLINDC PYLEALSDGL GNLVSLVELS LSNCKNLQHL PSRDAMRRLT KLRRLNIKGC
1201: PQLEESCTNR SGTNSQWSKI SHIPQISVEF TTIQDLRD

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.