Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014280 | Potato | extracellular, plasma membrane | 54.04 | 74.22 |
| PGSC0003DMT400054250 | Potato | cytosol | 70.88 | 71.5 |
| PGSC0003DMT400006336 | Potato | cytosol | 68.42 | 71.04 |
| PGSC0003DMT400008852 | Potato | mitochondrion | 46.32 | 70.78 |
| PGSC0003DMT400043990 | Potato | cytosol | 44.56 | 67.37 |
| PGSC0003DMT400019688 | Potato | cytosol, plasma membrane, plastid | 70.0 | 63.03 |
| PGSC0003DMT400051007 | Potato | cytosol | 42.81 | 53.39 |
| PGSC0003DMT400079273 | Potato | extracellular, plasma membrane | 71.05 | 49.82 |
| PGSC0003DMT400024123 | Potato | plasma membrane | 84.39 | 48.68 |
| Solyc08g076000.2.1 | Tomato | cytosol, endoplasmic reticulum | 83.33 | 48.08 |
| PGSC0003DMT400076092 | Potato | cytosol | 62.11 | 45.62 |
| PGSC0003DMT400043956 | Potato | cytosol | 72.63 | 41.82 |
| PGSC0003DMT400079272 | Potato | cytosol, plasma membrane | 72.28 | 41.41 |
| PGSC0003DMT400043963 | Potato | endoplasmic reticulum, plasma membrane | 69.12 | 40.33 |
| PGSC0003DMT400024063 | Potato | cytosol | 37.02 | 39.44 |
| PGSC0003DMT400046505 | Potato | plasma membrane | 48.07 | 39.09 |
| PGSC0003DMT400079342 | Potato | cytosol | 46.49 | 36.65 |
| PGSC0003DMT400022135 | Potato | cytosol, plasma membrane | 65.96 | 36.5 |
| PGSC0003DMT400024060 | Potato | cytosol | 22.98 | 31.57 |
| PGSC0003DMT400024057 | Potato | vacuole | 36.67 | 30.12 |
| PGSC0003DMT400079343 | Potato | cytosol | 33.33 | 29.87 |
| PGSC0003DMT400028879 | Potato | extracellular | 15.79 | 26.63 |
| PGSC0003DMT400021607 | Potato | cytosol | 20.7 | 24.89 |
| PGSC0003DMT400012963 | Potato | cytosol | 46.14 | 23.09 |
| PGSC0003DMT400028843 | Potato | cytosol | 31.4 | 22.6 |
| PGSC0003DMT400011307 | Potato | cytosol | 14.56 | 20.49 |
| TraesCS5D01G031100.1 | Wheat | mitochondrion | 26.84 | 19.72 |
| TraesCS7D01G123300.1 | Wheat | cytosol, mitochondrion, nucleus | 25.61 | 19.7 |
| KRH25740 | Soybean | cytosol | 31.75 | 19.4 |
| HORVU7Hr1G000950.1 | Barley | cytosol | 18.25 | 19.15 |
| HORVU7Hr1G002290.1 | Barley | cytosol | 21.93 | 19.14 |
| KRH11738 | Soybean | cytosol | 30.53 | 18.79 |
| KRH12679 | Soybean | nucleus | 32.98 | 18.61 |
| KRH36732 | Soybean | cytosol | 32.63 | 18.49 |
| KRH11739 | Soybean | cytosol | 32.63 | 18.43 |
| KRH36734 | Soybean | plasma membrane | 32.11 | 18.17 |
| KRH75154 | Soybean | cytosol | 27.89 | 17.95 |
| TraesCS7B01G096400.1 | Wheat | cytosol, extracellular, nucleus | 30.18 | 17.68 |
| PGSC0003DMT400065971 | Potato | cytosol | 29.82 | 17.67 |
| KRH74673 | Soybean | cytosol | 26.84 | 17.59 |
| KRH69482 | Soybean | cytosol | 25.96 | 17.23 |
| PGSC0003DMT400017461 | Potato | cytosol | 34.56 | 16.95 |
| KRH76379 | Soybean | cytosol | 16.49 | 16.91 |
| PGSC0003DMT400017408 | Potato | cytosol | 32.81 | 16.83 |
| KRH69426 | Soybean | cytosol | 25.96 | 16.74 |
| PGSC0003DMT400021294 | Potato | cytosol | 17.54 | 16.58 |
| PGSC0003DMT400056053 | Potato | cytosol | 31.4 | 16.1 |
| KRH69474 | Soybean | cytosol | 21.4 | 16.07 |
| PGSC0003DMT400008029 | Potato | cytosol | 32.98 | 15.96 |
| HORVU7Hr1G002260.2 | Barley | cytosol | 28.95 | 15.88 |
| PGSC0003DMT400049255 | Potato | cytosol | 25.61 | 15.84 |
| PGSC0003DMT400028871 | Potato | cytosol | 12.63 | 15.82 |
| TraesCS7D01G018200.1 | Wheat | cytosol | 23.33 | 15.57 |
| PGSC0003DMT400021631 | Potato | cytosol | 27.72 | 15.52 |
| PGSC0003DMT400071966 | Potato | nucleus | 32.98 | 15.15 |
| HORVU7Hr1G000890.2 | Barley | cytosol | 23.68 | 15.05 |
| TraesCS7D01G000900.1 | Wheat | plasma membrane | 29.12 | 15.02 |
| PGSC0003DMT400044170 | Potato | cytosol | 28.6 | 14.9 |
| PGSC0003DMT400033635 | Potato | extracellular, plasma membrane, plastid | 32.63 | 14.83 |
| TraesCS3B01G497800.1 | Wheat | cytosol | 25.09 | 14.79 |
| PGSC0003DMT400022156 | Potato | cytosol | 32.63 | 14.69 |
| PGSC0003DMT400028691 | Potato | cytosol | 33.16 | 14.65 |
| PGSC0003DMT400011301 | Potato | cytosol | 32.46 | 14.6 |
| Os05t0380300-01 | Rice | plasma membrane | 31.93 | 14.46 |
| PGSC0003DMT400049984 | Potato | cytosol | 30.88 | 14.44 |
| Os08t0543050-00 | Rice | cytosol, plastid | 30.53 | 14.38 |
| PGSC0003DMT400022154 | Potato | cytosol | 30.88 | 14.22 |
| EES14143 | Sorghum | cytosol | 28.77 | 14.03 |
| TraesCS5D01G398100.1 | Wheat | cytosol | 29.65 | 14.01 |
| TraesCS7D01G017700.1 | Wheat | cytosol | 28.25 | 13.99 |
| TraesCS7D01G018000.1 | Wheat | cytosol | 28.07 | 13.88 |
| HORVU7Hr1G000760.3 | Barley | cytosol | 23.33 | 13.85 |
| OQU80806 | Sorghum | cytosol | 28.07 | 13.84 |
| PGSC0003DMT400021634 | Potato | cytosol | 30.88 | 13.83 |
| TraesCS5D01G315800.1 | Wheat | extracellular, golgi, nucleus, plastid | 28.77 | 13.82 |
| TraesCS3B01G503600.1 | Wheat | extracellular, nucleus, plastid, vacuole | 21.93 | 13.75 |
| TraesCS7D01G017600.1 | Wheat | cytosol | 18.6 | 13.73 |
| Zm00001d031711_P001 | Maize | cytosol | 28.77 | 13.72 |
| Os08t0543100-00 | Rice | cytosol | 28.42 | 13.68 |
| EES14172 | Sorghum | cytosol | 28.25 | 13.52 |
| KRH70781 | Soybean | cytosol | 14.04 | 13.51 |
| TraesCS7B01G024900.1 | Wheat | cytosol | 25.79 | 13.5 |
| TraesCS7D01G122900.1 | Wheat | cytosol | 25.09 | 13.48 |
| HORVU7Hr1G026360.1 | Barley | extracellular | 25.26 | 13.31 |
| TraesCS7D01G123000.1 | Wheat | cytosol, plastid | 26.84 | 13.24 |
| TraesCS7B01G024700.1 | Wheat | cytosol | 24.91 | 13.18 |
| Os08t0543500-01 | Rice | cytosol, plastid | 26.67 | 13.18 |
| HORVU5Hr1G006710.5 | Barley | cytosol | 28.77 | 12.94 |
| TraesCS7D01G122700.1 | Wheat | cytosol | 23.51 | 12.87 |
| OQU80781 | Sorghum | cytosol, extracellular, nucleus | 25.96 | 12.45 |
| TraesCS7B01G339900.1 | Wheat | plasma membrane | 26.84 | 12.39 |
| TraesCS7D01G122800.1 | Wheat | cytosol | 14.91 | 11.82 |
| TraesCS7B01G056900.1 | Wheat | extracellular, plasma membrane | 14.91 | 11.46 |
| TraesCS7D01G018700.1 | Wheat | cytosol | 13.68 | 10.99 |
| PGSC0003DMT400028417 | Potato | cytosol, golgi, plastid | 5.44 | 8.45 |
| TraesCS7D01G018500.1 | Wheat | cytosol | 6.67 | 6.79 |
| Os08t0542200-01 | Rice | cytosol | 5.61 | 6.58 |
| TraesCS5B01G034600.1 | Wheat | cytosol | 4.74 | 5.96 |
| TraesCS7D01G017300.1 | Wheat | plasma membrane | 7.54 | 5.85 |
| TraesCS7D01G017400.1 | Wheat | cytosol, extracellular | 5.61 | 5.29 |
| TraesCS7B01G024600.1 | Wheat | cytosol | 5.44 | 5.02 |
| PGSC0003DMT400050981 | Potato | cytosol | 2.63 | 4.09 |
| KRH74677 | Soybean | cytosol | 2.11 | 2.72 |
| TraesCS5B01G034500.1 | Wheat | cytosol | 2.11 | 2.61 |
| TraesCS5B01G309200.1 | Wheat | cytosol | 0.7 | 0.91 |
| TraesCS7D01G017900.1 | Wheat | cytosol | 0.53 | 0.8 |
| TraesCS7D01G123100.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 0.35 | 0.45 |
| PGSC0003DMT400051008 | Potato | cytosol | 0.18 | 0.31 |
| PGSC0003DMT400028851 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400028882 | Potato | cytosol | 0.0 | 0.0 |
| TraesCS7B01G024800.1 | Wheat | cytosol, plastid | 0.0 | 0.0 |
| TraesCS7D01G001400.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 0.0 | 0.0 |
| TraesCS7D01G018400.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400051247 | EnsemblPlantsGene:PGSC0003DMG400019900 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR23155 |
| PANTHER:PTHR23155:SF863 | PFAM:PF13855 | PFscan:PS51450 | PGSC:PGSC0003DMG400019900 | SEG:seg | SMART:SM00369 |
| SUPFAM:SSF52058 | UniParc:UPI000294CD4C | UniProt:M1BRH7 | MapMan:35.1 | : | : |
Description
Disease resistance protein RGA4 [Source:PGSC_GENE;Acc:PGSC0003DMG400019900]
Coordinates
chr2:-:9112461..9117400
Molecular Weight (calculated)
64679.4 Da
IEP (calculated)
7.328
GRAVY (calculated)
-0.175
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKENLITLW MAHGFLLSKG NLELEDVGNE VWSELYLRSF FQEIEVKSGK TYFKMHDLIH DLATSLFSES VSSSNIRETN VKSYTHMMSI SFAEVVSSYS
101: PSLLKKFVSL RVLNLSYSKL EQLPSSIGNL LHLRYLDLSR NNFRSLPERL RKLQNLQTLD LHNCYSLYCL PKQTSKLGSL RNLVLDGCPL TSTPPRIGLL
201: TCLKTLGCFI VGSKKGYQPG ELKNLNLYGP ISITHLERVK NDKDAKEANL STKANLHSLT MSWDIDGPHS YESEEVKVLE ALKPHPNLKN LEIIAFGGFR
301: FPSWINRSVL EKVFSIRITS CKNCLCLPPF GELPCLESLE LQYGYAEVEY VEEEDAHSRF PTRRRFPSLK RLCIWFFHNL KGLVKEEGEE KFPMLEEMEI
401: LYCPMFVFPT LSSFKKLEVH GSRNATGLST ISNLSSLTSL RLGANNQVTS LPEEMFKSLT NLKYLTISYY KNLKELPTSL ASLNALQSLT IDYCEALESL
501: PEEGVKGLTS LTELFVEQCK MLKCLPEGLQ HLTTLTNLGV TGCPEVGTRC DTKIGEDWHK IAHIPNLDIR
101: PSLLKKFVSL RVLNLSYSKL EQLPSSIGNL LHLRYLDLSR NNFRSLPERL RKLQNLQTLD LHNCYSLYCL PKQTSKLGSL RNLVLDGCPL TSTPPRIGLL
201: TCLKTLGCFI VGSKKGYQPG ELKNLNLYGP ISITHLERVK NDKDAKEANL STKANLHSLT MSWDIDGPHS YESEEVKVLE ALKPHPNLKN LEIIAFGGFR
301: FPSWINRSVL EKVFSIRITS CKNCLCLPPF GELPCLESLE LQYGYAEVEY VEEEDAHSRF PTRRRFPSLK RLCIWFFHNL KGLVKEEGEE KFPMLEEMEI
401: LYCPMFVFPT LSSFKKLEVH GSRNATGLST ISNLSSLTSL RLGANNQVTS LPEEMFKSLT NLKYLTISYY KNLKELPTSL ASLNALQSLT IDYCEALESL
501: PEEGVKGLTS LTELFVEQCK MLKCLPEGLQ HLTTLTNLGV TGCPEVGTRC DTKIGEDWHK IAHIPNLDIR
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.