Factsheet for Solyc08g076000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024123	Potato	plasma membrane	95.45	95.45
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	48.08	83.33
Solyc09g064610.2.1	Tomato	nucleus	49.29	75.5
Solyc08g075630.2.1	Tomato	cytosol	67.51	72.03
Solyc08g075640.2.1	Tomato	cytosol	67.0	70.8
KRH74677	Soybean	cytosol	22.98	51.47
KRH75154	Soybean	cytosol	39.27	43.79
KRH70781	Soybean	cytosol	25.2	42.06
KRH69426	Soybean	cytosol	37.25	41.63
KRH11738	Soybean	cytosol	38.77	41.36
KRH69482	Soybean	cytosol	35.32	40.63
KRH74673	Soybean	cytosol	35.53	40.34
KRH36734	Soybean	plasma membrane	40.89	40.12
KRH76379	Soybean	cytosol	22.27	39.57
KRH36732	Soybean	cytosol	40.08	39.36
KRH11739	Soybean	cytosol	40.18	39.35
KRH12679	Soybean	nucleus	40.08	39.21
KRH25740	Soybean	cytosol	36.34	38.48
HORVU7Hr1G002290.1	Barley	cytosol	23.28	35.22
KRH69474	Soybean	cytosol	27.02	35.18
TraesCS5B01G034600.1	Wheat	cytosol	15.89	34.66
Os08t0542200-01	Rice	cytosol	17.0	34.57
TraesCS5B01G034500.1	Wheat	cytosol	15.89	34.2
TraesCS7D01G018400.1	Wheat	cytosol	11.03	33.96
TraesCS7D01G017600.1	Wheat	cytosol	26.01	33.29
HORVU7Hr1G000950.1	Barley	cytosol	17.91	32.6
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	14.27	32.56
TraesCS5B01G309200.1	Wheat	cytosol	14.37	32.27
TraesCS7D01G122800.1	Wheat	cytosol	23.38	32.13
TraesCS7D01G018500.1	Wheat	cytosol	18.12	31.96
TraesCS7D01G018200.1	Wheat	cytosol	27.53	31.85
TraesCS7B01G024800.1	Wheat	cytosol, plastid	12.96	31.84
Solyc01g088060.2.1	Tomato	cytosol	27.13	31.27
TraesCS7D01G017900.1	Wheat	cytosol	11.64	30.83
TraesCS7D01G018700.1	Wheat	cytosol	21.96	30.56
Solyc01g106410.1.1	Tomato	plasma membrane	35.93	30.5
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	22.87	30.46
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	18.22	29.75
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	27.33	29.7
TraesCS3B01G497800.1	Wheat	cytosol	28.95	29.58
HORVU7Hr1G000890.2	Barley	cytosol	26.82	29.54
TraesCS7B01G024600.1	Wheat	cytosol	18.02	28.85
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	12.85	28.35
HORVU7Hr1G000760.3	Barley	cytosol	27.23	28.02
TraesCS7D01G122900.1	Wheat	cytosol	29.86	27.8
HORVU7Hr1G026360.1	Barley	extracellular	30.06	27.45
TraesCS7D01G122700.1	Wheat	cytosol	28.85	27.38
HORVU7Hr1G002260.2	Barley	cytosol	28.74	27.33
Os05t0380300-01	Rice	plasma membrane	34.62	27.16
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	20.34	27.13
TraesCS7D01G017700.1	Wheat	cytosol	31.38	26.93
TraesCS7B01G024700.1	Wheat	cytosol	29.25	26.83
TraesCS7B01G024900.1	Wheat	cytosol	29.55	26.81
TraesCS7D01G018000.1	Wheat	cytosol	31.28	26.8
OQU80806	Sorghum	cytosol	31.07	26.56
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	31.88	26.54
EES14172	Sorghum	cytosol	31.68	26.28
Os08t0543100-00	Rice	cytosol	31.48	26.27
Os08t0543050-00	Rice	cytosol, plastid	31.88	26.03
Os08t0543500-01	Rice	cytosol, plastid	30.36	26.02
TraesCS7D01G000900.1	Wheat	plasma membrane	29.05	25.97
Solyc10g085460.1.1	Tomato	nucleus	32.09	25.81
TraesCS5D01G398100.1	Wheat	cytosol	31.48	25.79
TraesCS7D01G017300.1	Wheat	plasma membrane	19.13	25.71
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	25.2	25.59
TraesCS7D01G123000.1	Wheat	cytosol, plastid	29.86	25.52
EES14143	Sorghum	cytosol	29.96	25.32
OQU80781	Sorghum	cytosol, extracellular, nucleus	30.36	25.23
Zm00001d031711_P001	Maize	cytosol	29.86	24.69
TraesCS5D01G031100.1	Wheat	mitochondrion	19.23	24.48
TraesCS7B01G339900.1	Wheat	plasma membrane	29.76	23.81
HORVU5Hr1G006710.5	Barley	cytosol	30.06	23.44

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR001611	InterPro:IPR032675	UniProt:K4CMW7	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155
PANTHER:PTHR23155:SF863	InterPro:RX-like_CC	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc08g076000.2	EnsemblPlants:Solyc08g076000.2.1	UniParc:UPI000276BAD1	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:60062860..60066981

Molecular Weight (calculated)

112138.0 Da

IEP (calculated)

7.364

GRAVY (calculated)

-0.203

Length

988 amino acids

Sequence
(BLAST)

001: MAEAFLQVVL ENLTSFIGGK LVLIFGFEKE FEKLSSVFST IQAVLQDAQE KQLKDKSIEN WLQKLNSAAY EVDDILGECK NEATRFEQSR LGFFHPGIIN
101: FRHKIGKRMK EIMEKLDAIA EDRRKFHFLE KITERQAAAA TRETGFVLTE PKVYGRDKEE DEIVKILINN INVAEELPVF PIIGMGGLGK TTLAQMIFND
201: QRVTKHFDPK IWVCVSDDFD EKRLIKTIVG NIERSSPHVE DLASFQKKLQ ELLNKKRYLL VLDDVWNDDL EKWAKLRAVL NVGARGASIL ATTRLEKVGS
301: IMGTSQPYHL SNLSPHDSLL LFMQRAFGQQ REANPNLVAI GKEIVKKCGG VPLAAKTLGG LLRFKREESE WEHVRDNEIW SLPQDESSIL PALRLSYHHL
401: PLDLRQCFAY CAVFPKDTKM IKENLITLWM AHGFLLSKGN LELEDVGNEV WNELYLRCFF QEIEAKSGNT YFKIHDLIHD LATSLFLASA SSSNIREINV
501: KDYKHTMSIG FAGVVSSYSP PLLKKFVSLR VLNLSYSKLE QLPSSIGDLL HLRYLDLSRN NFHSLPERLC KLQNLQTLDV HNCYSLNCLP KQTSKLSSLR
601: NLVLDGCPLT STPPRIGLLT CLKTLGFFIV GSKKGHQLGE LKNLNLCGSI SIAHLERVKN DTDAEANLSA KANLQSLSMS WDNDGPNRYE SEEVKVLEAL
701: KPHPNLKYLE IIAFGGFHFP SWINHSVLKK VISIRIKSCK NCLCLPPFGE LPCLESLELQ NGSVEVEYVE EDDVHSRFST RRRFPSLKKL RIWFFRNLKG
801: LVKEEGEEKF PMLEEMAILH CPLFVFPTLS SVKKLEVHGN IKARGLSSIS NLSTLTSLRI GANYGSTSLP EEMFTSLTYL EYLSFFDFKN LKELPTSLTS
901: LNALKRLQIE SCDSLESFPE QGLEGLTSLT QLFVKYCKML KRLPEGLQHL TALTDLGVTG CPEVEKRCDK EIGEDWHKIA HIPNLDIH

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.