CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25740	Soybean	cytosol	74.75	80.92
KRH11739	Soybean	cytosol	80.2	80.28
KRH11738	Soybean	cytosol	72.77	79.37
KRH36732	Soybean	cytosol	78.51	78.83
KRH36734	Soybean	plasma membrane	78.02	78.25
KRH74677	Soybean	cytosol	31.88	73.02
KRH75154	Soybean	cytosol	61.88	70.54
KRH69482	Soybean	cytosol	58.32	68.57
KRH74673	Soybean	cytosol	58.91	68.39
KRH69426	Soybean	cytosol	58.32	66.63
KRH70781	Soybean	cytosol	37.62	64.19
KRH69474	Soybean	cytosol	37.43	49.8
PGSC0003DMT400050981	Potato	cytosol	18.02	49.59
PGSC0003DMT400024060	Potato	cytosol	19.9	48.43
PGSC0003DMT400024057	Potato	vacuole	31.98	46.54
PGSC0003DMT400051008	Potato	cytosol	14.36	45.31
PGSC0003DMT400051007	Potato	cytosol	20.3	44.86
PGSC0003DMT400046505	Potato	plasma membrane	30.69	44.22
Solyc09g064610.2.1	Tomato	nucleus	27.13	42.48
KRH76379	Soybean	cytosol	23.27	42.27
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	39.51	40.84
Solyc08g075640.2.1	Tomato	cytosol	37.52	40.53
PGSC0003DMT400024123	Potato	plasma membrane	39.41	40.28
Solyc08g076000.2.1	Tomato	cytosol, endoplasmic reticulum	39.21	40.08
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	40.79	40.0
PGSC0003DMT400076092	Potato	cytosol	30.69	39.95
PGSC0003DMT400043956	Potato	cytosol	38.81	39.6
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	38.91	39.5
Solyc08g075630.2.1	Tomato	cytosol	35.84	39.09
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	16.04	39.04
PGSC0003DMT400024063	Potato	cytosol	20.5	38.69
PGSC0003DMT400079343	Potato	cytosol	24.26	38.52
PGSC0003DMT400079342	Potato	cytosol	27.33	38.17
PGSC0003DMT400012963	Potato	cytosol	40.4	35.82
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	22.08	35.23
TraesCS5B01G034600.1	Wheat	cytosol	15.74	35.1
TraesCS5B01G034500.1	Wheat	cytosol	15.94	35.08
HORVU7Hr1G002290.1	Barley	cytosol	22.57	34.92
TraesCS7D01G018400.1	Wheat	cytosol	10.99	34.58
TraesCS7D01G122800.1	Wheat	cytosol	24.55	34.49
TraesCS7D01G017600.1	Wheat	cytosol	26.14	34.2
Os08t0542200-01	Rice	cytosol	16.44	34.16
TraesCS7B01G024800.1	Wheat	cytosol, plastid	13.56	34.08
HORVU7Hr1G000950.1	Barley	cytosol	17.92	33.33
PGSC0003DMT400054250	Potato	cytosol	18.51	33.1
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	18.61	32.98
TraesCS7D01G018500.1	Wheat	cytosol	18.02	32.5
PGSC0003DMT400006336	Potato	cytosol	17.62	32.42
KRH62859	Soybean	cytosol, extracellular	27.62	32.25
TraesCS7D01G018700.1	Wheat	cytosol	22.57	32.11
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	13.76	32.1
TraesCS7D01G018200.1	Wheat	cytosol	27.13	32.08
TraesCS5B01G309200.1	Wheat	cytosol	13.96	32.05
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	23.37	31.81
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	18.91	31.57
HORVU7Hr1G000890.2	Barley	cytosol	27.92	31.44
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	27.92	31.02
TraesCS7D01G017900.1	Wheat	cytosol	11.39	30.83
TraesCS7B01G024600.1	Wheat	cytosol	18.81	30.79
TraesCS7B01G024900.1	Wheat	cytosol	32.18	29.84
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	21.88	29.82
PGSC0003DMT400008852	Potato	mitochondrion	10.99	29.76
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	13.17	29.69
TraesCS7D01G122900.1	Wheat	cytosol	31.09	29.59
TraesCS3B01G497800.1	Wheat	cytosol	28.12	29.37
TraesCS7D01G122700.1	Wheat	cytosol	30.1	29.2
HORVU7Hr1G026360.1	Barley	extracellular	31.09	29.02
TraesCS7B01G024700.1	Wheat	cytosol	30.89	28.97
HORVU7Hr1G000760.3	Barley	cytosol	27.03	28.44
HORVU7Hr1G002260.2	Barley	cytosol	29.01	28.2
OQU80806	Sorghum	cytosol	32.18	28.11
PGSC0003DMT400043990	Potato	cytosol	10.4	27.85
OQU80781	Sorghum	cytosol, extracellular, nucleus	32.67	27.75
Os08t0543100-00	Rice	cytosol	32.38	27.62
TraesCS7D01G000900.1	Wheat	plasma membrane	30.1	27.51
TraesCS7D01G018000.1	Wheat	cytosol	31.39	27.49
TraesCS7D01G123000.1	Wheat	cytosol, plastid	31.39	27.42
Os08t0543500-01	Rice	cytosol, plastid	31.29	27.41
Os05t0380300-01	Rice	plasma membrane	34.16	27.4
TraesCS7D01G017300.1	Wheat	plasma membrane	19.9	27.35
TraesCS7D01G017700.1	Wheat	cytosol	30.99	27.19
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	26.14	27.13
EES14172	Sorghum	cytosol	31.58	26.78
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	31.39	26.71
Os08t0543050-00	Rice	cytosol, plastid	31.88	26.61
TraesCS5D01G398100.1	Wheat	cytosol	31.58	26.45
EES14143	Sorghum	cytosol	30.0	25.92
TraesCS7B01G339900.1	Wheat	plasma membrane	31.39	25.67
Zm00001d031711_P001	Maize	cytosol	29.7	25.1
HORVU5Hr1G006710.5	Barley	cytosol	31.39	25.02
TraesCS5D01G031100.1	Wheat	mitochondrion	19.11	24.87
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	18.02	22.39

Protein Annotations

EntrezGene:106796110	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A0R0G3M0	EMBL:ACUP02009364
ncoils:Coil	EnsemblPlantsGene:GLYMA_15G186800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	EnsemblPlants:KRH12679
ProteinID:KRH12679	ProteinID:KRH12679.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF863	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI00023D2C29	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:19312523..19315555

Molecular Weight (calculated)

116320.0 Da

IEP (calculated)

6.743

GRAVY (calculated)

-0.278

Length

1010 amino acids

Sequence
(BLAST)

0001: MAEFVIETLL GNLNSLVQKE LQPFLGFDQD LERLSGLLTT IKATLEDAEE KQFSNKDIKD WLGKLKHAAH NLDDIIDECA YEVMRLEYEG VKCGPLNKLQ
0101: CYCLSSFHPK RVVFHYKISK KMKRISERLR EIDEERTKFP LIEMVHERRR RVLEWRQTVS RVTEPKVYGR EEDKDKILDF LIGDASHFEY LSVYPITGLG
0201: GLGKTTLAQF IFNHKRVINH FELRIWVCVS EDFSLERMMK AIIEAASGHA CTDLDLGSQQ RRIHDMLQRK RYLLVLDDVW DDKQENWERL KSVLSCGAKG
0301: ASILVTTRQS KVATILGTVC PHELPILPDK YCWELFKQQA FGPNEEAQVE LADVGKEIVK KCQGVPLAAK ALGGLLRFKR NKNEWLNVKD SKLLELPHNE
0401: NSIIPVLRLS YLNLPIEHRQ CFSYCAIFPK DERIGKQYLI ELWMANGFIS SNEKLDVEDV GDDVWNELYW RSFFQDIETD EFGKVTSFKM HDLVHDLAES
0501: ITEDVCCITE ENRVTTLHER ILHLSDHRSM RNVDEESTSS AQLHLVKSLR TYILPDLYGD QLSPHADVLK CNSLRVLDFV KRETLSSSIG LLKHLRYLNL
0601: SGSGFEILPE SLCKLWNLQI LKLDRCIHLK MLPNNLICLK DLKQLSFNDC PKLSNLPPHI GMLTSLKILT KFIVGKEKGF SLEELGPLKL KRDLDIKHLG
0701: NVKSVMDAKE ANMSSKQLNK LWLSWERNED SELQENVEGI LEVLQPDTQQ LRKLEVEGYK GARFPQWMSS PSLKHLSILI LMNCENCVQL PPLGKLPSLK
0801: ILRASHMNNV EYLYDEESSN GEVVFRALED LTFRGLPKFK RLSREEGKIM FPSLSILEID ECPQFLGEEV LLKGLDSLSV FNCSKFNVSA GFSRLWKLWL
0901: SNCRDVGDLQ ALQDMTSLKV LRLKNLPKLE SLPDCFGNLP LLCDLSIFYC SKLTCLPLSL RLTNLQQLTI FGCHPKLEKR CEKETGDDWL NIAHIPHISV
1001: GYKHYDHISD

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.