Factsheet for PGSC0003DMT400024057

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051008	Potato	cytosol	35.45	76.88
PGSC0003DMT400050981	Potato	cytosol	40.35	76.29
PGSC0003DMT400024060	Potato	cytosol	45.53	76.14
PGSC0003DMT400051007	Potato	cytosol	43.37	65.86
PGSC0003DMT400024063	Potato	cytosol	47.84	62.06
PGSC0003DMT400046505	Potato	plasma membrane	62.68	62.05
PGSC0003DMT400079343	Potato	cytosol	53.6	58.49
PGSC0003DMT400024123	Potato	plasma membrane	76.37	53.64
PGSC0003DMT400043956	Potato	cytosol	75.22	52.73
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	72.62	51.59
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	73.78	51.46
PGSC0003DMT400076092	Potato	cytosol	56.48	50.52
KRH74677	Soybean	cytosol	31.84	50.11
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	73.2	49.32
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	28.96	48.43
PGSC0003DMT400079342	Potato	cytosol	46.54	44.67
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	36.74	40.28
KRH76379	Soybean	cytosol	31.27	39.03
KRH70781	Soybean	cytosol	33.0	38.68
KRH75154	Soybean	cytosol	48.7	38.15
KRH69426	Soybean	cytosol	47.69	37.44
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	30.12	36.67
TraesCS7D01G018400.1	Wheat	cytosol	16.86	36.45
TraesCS5B01G034600.1	Wheat	cytosol	23.78	36.42
KRH69482	Soybean	cytosol	44.96	36.32
PGSC0003DMT400028879	Potato	extracellular	17.44	35.8
Os08t0542200-01	Rice	cytosol	24.64	35.19
KRH74673	Soybean	cytosol	44.09	35.17
KRH11738	Soybean	cytosol	46.4	34.77
TraesCS5B01G034500.1	Wheat	cytosol	22.77	34.42
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	21.33	34.18
PGSC0003DMT400054250	Potato	cytosol	27.81	34.16
TraesCS7B01G024800.1	Wheat	cytosol, plastid	19.74	34.08
PGSC0003DMT400011307	Potato	cytosol	19.74	33.83
PGSC0003DMT400012963	Potato	cytosol	54.18	33.01
PGSC0003DMT400006336	Potato	cytosol	26.08	32.97
TraesCS5B01G309200.1	Wheat	cytosol	20.89	32.95
TraesCS7D01G018500.1	Wheat	cytosol	26.51	32.86
TraesCS7D01G017900.1	Wheat	cytosol	17.58	32.71
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	17.29	32.7
TraesCS7D01G122800.1	Wheat	cytosol	33.29	32.13
KRH11739	Soybean	cytosol	46.54	32.01
KRH12679	Soybean	nucleus	46.54	31.98
TraesCS7D01G018700.1	Wheat	cytosol	32.71	31.97
KRH36732	Soybean	cytosol	46.25	31.91
KRH36734	Soybean	plasma membrane	45.82	31.58
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	27.38	31.41
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	33.43	31.27
TraesCS7D01G017600.1	Wheat	cytosol	34.73	31.22
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	20.03	31.03
KRH25740	Soybean	cytosol	41.64	30.98
HORVU7Hr1G002290.1	Barley	cytosol	28.24	30.02
TraesCS7B01G024600.1	Wheat	cytosol	26.66	29.98
PGSC0003DMT400028882	Potato	cytosol	11.67	28.72
HORVU7Hr1G000950.1	Barley	cytosol	22.33	28.55
PGSC0003DMT400028851	Potato	cytosol	16.86	28.33
TraesCS7D01G018200.1	Wheat	cytosol	33.72	27.4
PGSC0003DMT400028871	Potato	cytosol	17.87	27.25
PGSC0003DMT400021607	Potato	cytosol	17.72	25.95
KRH69474	Soybean	cytosol	28.24	25.82
TraesCS7D01G017300.1	Wheat	plasma membrane	26.8	25.31
TraesCS3B01G497800.1	Wheat	cytosol	35.16	25.23
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	33.0	25.19
PGSC0003DMT400017408	Potato	cytosol	39.77	24.84
PGSC0003DMT400049255	Potato	cytosol	33.0	24.84
HORVU7Hr1G000890.2	Barley	cytosol	31.56	24.41
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	27.95	23.86
TraesCS7D01G122900.1	Wheat	cytosol	34.87	22.81
TraesCS7D01G122700.1	Wheat	cytosol	34.15	22.77
PGSC0003DMT400044170	Potato	cytosol	35.88	22.76
HORVU7Hr1G000760.3	Barley	cytosol	31.27	22.6
PGSC0003DMT400021294	Potato	cytosol	19.45	22.39
PGSC0003DMT400021631	Potato	cytosol	32.71	22.3
HORVU7Hr1G026360.1	Barley	extracellular	34.73	22.27
TraesCS7B01G024700.1	Wheat	cytosol	34.44	22.19
TraesCS7B01G024900.1	Wheat	cytosol	34.58	22.04
PGSC0003DMT400008029	Potato	cytosol	36.74	21.65
PGSC0003DMT400017461	Potato	cytosol	35.59	21.26
TraesCS7D01G018000.1	Wheat	cytosol	35.16	21.16
TraesCS7D01G017700.1	Wheat	cytosol	35.01	21.11
TraesCS7D01G123000.1	Wheat	cytosol, plastid	35.01	21.02
HORVU7Hr1G002260.2	Barley	cytosol	31.41	20.98
Os08t0543100-00	Rice	cytosol	35.59	20.86
Os05t0380300-01	Rice	plasma membrane	37.46	20.65
OQU80806	Sorghum	cytosol	33.72	20.24
OQU80781	Sorghum	cytosol, extracellular, nucleus	34.58	20.18
Os08t0543500-01	Rice	cytosol, plastid	33.43	20.12
EES14172	Sorghum	cytosol	33.86	19.73
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	33.72	19.71
TraesCS5D01G398100.1	Wheat	cytosol	34.01	19.57
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	35.01	19.38
TraesCS7D01G000900.1	Wheat	plasma membrane	30.69	19.28
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	20.46	19.16
EES14143	Sorghum	cytosol	32.28	19.16
Os08t0543050-00	Rice	cytosol, plastid	33.29	19.09
Zm00001d031711_P001	Maize	cytosol	32.85	19.08
PGSC0003DMT400049984	Potato	cytosol	33.29	18.95
TraesCS7B01G339900.1	Wheat	plasma membrane	33.43	18.79
PGSC0003DMT400071966	Potato	nucleus	33.29	18.61
HORVU5Hr1G006710.5	Barley	cytosol	33.29	18.23
PGSC0003DMT400022154	Potato	cytosol	32.42	18.17
PGSC0003DMT400022156	Potato	cytosol	33.14	18.17
PGSC0003DMT400011301	Potato	cytosol	33.14	18.15
PGSC0003DMT400028691	Potato	cytosol	33.57	18.06
PGSC0003DMT400056053	Potato	cytosol	28.53	17.81
PGSC0003DMT400021634	Potato	cytosol	32.56	17.75
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	24.06	17.16
PGSC0003DMT400008852	Potato	mitochondrion	8.36	15.55
PGSC0003DMT400065971	Potato	cytosol	21.47	15.49
PGSC0003DMT400043990	Potato	cytosol	8.21	15.12
TraesCS5D01G031100.1	Wheat	mitochondrion	16.14	14.43
PGSC0003DMT400028843	Potato	cytosol	13.83	12.12

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	InterPro:IPR001611	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1AJE1	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG401009305	PGSC:PGSC0003DMG401009305	EnsemblPlants:PGSC0003DMT400024057	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155
PANTHER:PTHR23155:SF863	InterPro:RX-like_CC	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002959A0D
InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:	:

Description

Disease resistance protein RGA3 [Source:PGSC_GENE;Acc:PGSC0003DMG401009305]

Coordinates

chr8:-:48588512..48596268

Molecular Weight (calculated)

79320.2 Da

IEP (calculated)

6.821

GRAVY (calculated)

-0.226

Length

694 amino acids

Sequence
(BLAST)

001: MAGAFLQVLL DDLTFFIQGE LGLVFGFEKE FKKLSSMFSM IQAVLEDAQE KQLKYKAIKN WLQKLNVAAY EVDDILDDCK TEAARFKQAV LRHYHPRTIT
101: FCYKVGKRMK EMMEKLDAIA EERRNFHLDE RIIERQAARR QTGFVLTEPK VNGRDKEEDE IVKILINNAS DSEEVPVLPI LGMGGLGKTT LAQMVFNDQR
201: VTEHFNLKIW VCVSDDFDEK RLIKAIVESI EGKSLGDMDL APLQKKLQEL LNGKRYFLVL DDVWNEDQEK WDNLRAVLKI GASGASILIT TRLEKIGSIM
301: GTLQLYQLSN LSQEDCWLLF KQRAFGHQTE TSPKLMEIGK EIVKKCGGVP LAAKTLGGLL CLKREESEWE HVRDSEIWNL PQDENSVLPA LRLSYHHLPL
401: DLRQCFAYCA VFPKGTKIEK EYLIALWMAH SFLLSKGNME LEDVGNEVWN ELYLRSFFQE IEVKSGKTYF KMHDLIHDLA TSMFSASASS RSIRQINVKD
501: DEDMMFIVTD YKDMMSIGFS EVVSSYSPSL FKRFVSLRVL NLSNSEFEQL SSSVGDLVNL RYFDLSGNKI CSLPKRLCRL QNLQTLDLHN CQSLSCLPKQ
601: ISKLGSLRNL VFDHCPLTAM PPRIGLLTCL KTLSYFLVGE RKGYQLGELR NLNLRGAISI THLERVKNDM EAKEANLSAK ANLHSLSMSW DGPH

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.