Factsheet for PGSC0003DMT400065971

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021607	Potato	cytosol	38.05	77.22
PGSC0003DMT400028879	Potato	extracellular	26.82	76.33
PGSC0003DMT400011307	Potato	cytosol	30.56	72.59
PGSC0003DMT400028843	Potato	cytosol	58.84	71.46
PGSC0003DMT400021294	Potato	cytosol	43.87	69.98
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	26.4	69.21
PGSC0003DMT400028871	Potato	cytosol	30.67	64.84
PGSC0003DMT400056053	Potato	cytosol	72.77	62.95
PGSC0003DMT400071966	Potato	nucleus	77.65	60.19
PGSC0003DMT400028691	Potato	cytosol	79.21	59.07
PGSC0003DMT400049984	Potato	cytosol	74.43	58.74
PGSC0003DMT400011301	Potato	cytosol	75.88	57.62
PGSC0003DMT400022156	Potato	cytosol	74.95	56.95
PGSC0003DMT400021634	Potato	cytosol	74.53	56.32
PGSC0003DMT400021631	Potato	cytosol	59.15	55.89
PGSC0003DMT400022154	Potato	cytosol	70.89	55.09
PGSC0003DMT400049255	Potato	cytosol	50.42	52.6
PGSC0003DMT400028851	Potato	cytosol	13.83	32.2
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	41.68	31.98
PGSC0003DMT400051007	Potato	cytosol	14.76	31.07
PGSC0003DMT400024060	Potato	cytosol	13.31	30.84
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	13.2	30.6
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	17.67	29.82
PGSC0003DMT400028882	Potato	cytosol	8.73	29.79
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	19.02	28.91
HORVU7Hr1G000950.1	Barley	cytosol	16.11	28.55
PGSC0003DMT400076092	Potato	cytosol	22.14	27.45
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	21.1	27.4
PGSC0003DMT400054250	Potato	cytosol	15.9	27.08
PGSC0003DMT400006336	Potato	cytosol	15.38	26.96
HORVU7Hr1G002290.1	Barley	cytosol	18.19	26.8
PGSC0003DMT400043990	Potato	cytosol	10.08	25.73
PGSC0003DMT400008852	Potato	mitochondrion	9.88	25.47
TraesCS5D01G031100.1	Wheat	mitochondrion	19.54	24.23
PGSC0003DMT400024123	Potato	plasma membrane	24.32	23.68
PGSC0003DMT400046505	Potato	plasma membrane	17.15	23.54
PGSC0003DMT400017408	Potato	cytosol	26.92	23.31
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	24.53	22.91
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	23.08	22.82
PGSC0003DMT400079342	Potato	cytosol	16.94	22.55
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	22.87	22.52
PGSC0003DMT400008029	Potato	cytosol	27.44	22.41
HORVU7Hr1G000890.2	Barley	cytosol	20.89	22.41
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	22.97	22.21
PGSC0003DMT400017461	Potato	cytosol	26.82	22.2
PGSC0003DMT400043956	Potato	cytosol	22.66	22.02
PGSC0003DMT400024063	Potato	cytosol	12.16	21.87
TraesCS7D01G018200.1	Wheat	cytosol	19.33	21.78
HORVU7Hr1G002260.2	Barley	cytosol	23.28	21.56
PGSC0003DMT400024057	Potato	vacuole	15.49	21.47
PGSC0003DMT400012963	Potato	cytosol	25.26	21.33
TraesCS7D01G000900.1	Wheat	plasma membrane	23.91	20.81
OQU80806	Sorghum	cytosol	24.95	20.76
TraesCS7D01G122900.1	Wheat	cytosol	22.87	20.74
TraesCS7D01G122700.1	Wheat	cytosol	22.25	20.56
HORVU7Hr1G000760.3	Barley	cytosol	20.48	20.52
OQU80781	Sorghum	cytosol, extracellular, nucleus	25.26	20.44
TraesCS7B01G024700.1	Wheat	cytosol	22.87	20.43
Os08t0542200-01	Rice	cytosol	10.29	20.37
TraesCS7B01G024900.1	Wheat	cytosol	22.97	20.29
Zm00001d031711_P001	Maize	cytosol	25.16	20.25
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	24.95	20.22
EES14172	Sorghum	cytosol	24.95	20.15
HORVU7Hr1G026360.1	Barley	extracellular	22.66	20.15
Os08t0543050-00	Rice	cytosol, plastid	25.16	20.0
Os05t0380300-01	Rice	plasma membrane	26.09	19.94
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	18.82	19.91
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	16.74	19.8
EES14143	Sorghum	cytosol	24.01	19.76
TraesCS3B01G497800.1	Wheat	cytosol	19.85	19.75
TraesCS7D01G017600.1	Wheat	cytosol	15.8	19.69
TraesCS7D01G123000.1	Wheat	cytosol, plastid	23.6	19.64
TraesCS7D01G017700.1	Wheat	cytosol	23.49	19.64
Os08t0543100-00	Rice	cytosol	23.91	19.43
TraesCS7A01G535400.1	Wheat	plasma membrane	18.4	19.32
TraesCS7D01G018700.1	Wheat	cytosol	14.14	19.15
Os08t0543500-01	Rice	cytosol, plastid	22.87	19.08
TraesCS5D01G398100.1	Wheat	cytosol	23.91	19.07
TraesCS7D01G122800.1	Wheat	cytosol	14.24	19.05
PGSC0003DMT400044170	Potato	cytosol	21.62	19.01
TraesCS5B01G034600.1	Wheat	cytosol	8.94	18.98
TraesCS7D01G018000.1	Wheat	cytosol	22.66	18.91
PGSC0003DMT400050981	Potato	cytosol	7.07	18.53
HORVU5Hr1G006710.5	Barley	cytosol	24.32	18.47
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	14.14	18.33
TraesCS7D01G018500.1	Wheat	cytosol	10.39	17.86
TraesCS7B01G339900.1	Wheat	plasma membrane	22.66	17.65
PGSC0003DMT400079343	Potato	cytosol	11.33	17.14
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	10.71	17.02
TraesCS7D01G017300.1	Wheat	plasma membrane	12.89	16.87
TraesCS7B01G024600.1	Wheat	cytosol	10.6	16.53
TraesCS5B01G309200.1	Wheat	cytosol	7.48	16.36
TraesCS5B01G034500.1	Wheat	cytosol	7.38	15.47
TraesCS7A01G535300.1	Wheat	cytosol	2.39	14.84
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	6.03	13.39
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	6.03	12.95
TraesCS7D01G018400.1	Wheat	cytosol	4.16	12.46
TraesCS7B01G024800.1	Wheat	cytosol, plastid	5.2	12.44
TraesCS7D01G017900.1	Wheat	cytosol	3.74	9.65
PGSC0003DMT400051008	Potato	cytosol	2.81	8.44

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1CEV6	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400025683	PGSC:PGSC0003DMG400025683	EnsemblPlants:PGSC0003DMT400065971	PRINTS:PR00364	PFscan:PS51450
PANTHER:PTHR23155	PANTHER:PTHR23155:SF877	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00029494CB	SEG:seg

Description

Cc-nbs-lrr resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025683]

Coordinates

chr10:-:13624148..13628555

Molecular Weight (calculated)

110680.0 Da

IEP (calculated)

5.693

GRAVY (calculated)

-0.207

Length

962 amino acids

Sequence
(BLAST)

001: MHGRVLTKKK VEVQSRDIIV QTLQDELGEK KYLLVLDDMW RVNSTSWHEF MDTLREINTS KGNYILVTTR IKQVASTIAV DLHMLRRLAR DHCWSIFKQR
101: AFVDREVPEE ILSVENKIVE MCQGLPLAAS VLGGLICNKD KHEWQAILDG NPLVAGEDDN GENSIKKILK LSYDYLPSPH LKKCFAYFAM FPKDFEFEKD
201: QLIQLWMAEG FLRPCQETPV MEDVGNKFFQ LLLQYSLLLN VELDVHNNTI CKMHDLLHDL AGDILKSKLF DQKSVGAENL SQVRYFGWDS PSDQIDKINE
301: PRRLCTLFWK SNISDDMLLS FQFLKVLNLS GSGIEGLSAK ISKLIYLRYL DLSNTEIEDL PNSICKLYNL QTFRVNNCFS LRKLPEEMEN MISLEKGRRI
401: EELGHLKNLR GELTIKGLQL VRNTDEARTT YLHEKPNIYQ LVYLWSHDES ESCEINDECV LDGLQPHPNL KNLEMENYLG TSFPSWFSEE LLPNLVELKL
501: SCCKRCKEIP SLGQLKFLRH LELIGFLELE CIGPKFYGVE INDNGSRSNN DNIQVFPSLK ELVLEDMHSL IEWKGDEVRV RMFPGLEKLR ITECPLLKGT
601: PTQFEILREL RIERVDSEMP LLNLCSNLTS LVDLVVSNVK ELTCLPDEML RNNVSLQHLS VSECGEFREL PQSLYNLHSL KRLEITSCTN FSCFPVPSRE
701: NYLTSLQSLE LCYCDILTSL PSGMLDHCLS LVSLNVFHCN NLVPFPLPSG GLHRLGILRI GPFSEMVNFE AFQLIFNGIQ QLLSLRRLCV YGRLHWDSLP
801: SQLMQLSHLT HIYIYDFGIE ALPHSLDNLT SLETLQLMRC KQLQHLDFSD AIPKLRYLRM YDCPLLEGMS DGLGNLFSLK QLSFWNCEKL DHLPSRDAMR
901: RLTKLWNLGC PQLEESCTNQ SSANSQWSNI SHIPKIEVGG SIIQDRRAMM KILNGDNSMN GD

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.