Factsheet for PGSC0003DMT400017461

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044170	Potato	cytosol	42.0	44.61
VIT_19s0027g01170.t01	Wine grape	cytosol	31.67	42.25
KRH62859	Soybean	cytosol, extracellular	30.81	41.39
VIT_19s0027g00660.t01	Wine grape	cytosol	29.17	41.04
PGSC0003DMT400024060	Potato	cytosol	14.37	40.24
VIT_13s0084g00060.t01	Wine grape	cytosol	33.82	38.83
PGSC0003DMT400051007	Potato	cytosol	15.15	38.51
Os08t0542200-01	Rice	cytosol	15.75	37.65
PGSC0003DMT400050981	Potato	cytosol	11.7	37.06
VIT_19s0027g01350.t01	Wine grape	cytosol	37.18	36.83
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	30.89	36.75
TraesCS7D01G018400.1	Wheat	cytosol	10.07	36.45
PGSC0003DMT400046505	Potato	plasma membrane	21.86	36.23
TraesCS5B01G034600.1	Wheat	cytosol	14.03	35.98
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	19.54	35.86
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	12.74	35.66
PGSC0003DMT400024123	Potato	plasma membrane	30.29	35.63
PGSC0003DMT400024057	Potato	vacuole	21.26	35.59
PGSC0003DMT400028879	Potato	extracellular	10.33	35.5
PGSC0003DMT400022135	Potato	cytosol, plasma membrane	31.41	35.44
PGSC0003DMT400076092	Potato	cytosol	23.58	35.31
PGSC0003DMT400043956	Potato	cytosol	30.03	35.25
PGSC0003DMT400051008	Potato	cytosol	9.64	35.0
TraesCS5B01G309200.1	Wheat	cytosol	13.25	35.0
TraesCS7D01G122800.1	Wheat	cytosol	21.6	34.91
PGSC0003DMT400021607	Potato	cytosol	14.2	34.81
PGSC0003DMT400079342	Potato	cytosol	21.6	34.72
TraesCS7D01G017900.1	Wheat	cytosol	11.1	34.58
PGSC0003DMT400017408	Potato	cytosol	33.05	34.56
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	16.95	34.56
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	29.52	34.47
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	10.84	34.33
TraesCS7D01G017600.1	Wheat	cytosol	22.81	34.33
TraesCS5B01G034500.1	Wheat	cytosol	13.51	34.2
TraesCS7D01G018700.1	Wheat	cytosol	20.83	34.08
PGSC0003DMT400008852	Potato	mitochondrion	10.93	34.05
HORVU7Hr1G002290.1	Barley	cytosol	19.02	33.84
TraesCS7B01G024800.1	Wheat	cytosol, plastid	11.7	33.83
PGSC0003DMT400011307	Potato	cytosol	11.79	33.83
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	12.56	33.72
PGSC0003DMT400079343	Potato	cytosol	18.42	33.65
TraesCS7D01G018500.1	Wheat	cytosol	16.09	33.39
PGSC0003DMT400006336	Potato	cytosol	15.75	33.33
TraesCS7D01G018200.1	Wheat	cytosol	24.35	33.14
PGSC0003DMT400054250	Potato	cytosol	16.01	32.92
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	21.0	32.88
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	12.65	32.81
PGSC0003DMT400012963	Potato	cytosol	32.1	32.75
PGSC0003DMT400008029	Potato	cytosol	33.05	32.6
HORVU7Hr1G000950.1	Barley	cytosol	15.23	32.6
PGSC0003DMT400021294	Potato	cytosol	16.78	32.34
GSMUA_Achr5P11640_001	Banana	cytosol	31.5	32.11
TraesCS7D01G122700.1	Wheat	cytosol	28.74	32.08
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	16.7	32.07
TraesCS7B01G024600.1	Wheat	cytosol	16.95	31.93
PGSC0003DMT400043990	Potato	cytosol	10.33	31.83
PGSC0003DMT400049255	Potato	cytosol	25.13	31.67
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	20.14	31.58
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	24.7	31.57
PGSC0003DMT400024063	Potato	cytosol	14.46	31.4
TraesCS7D01G122900.1	Wheat	cytosol	28.57	31.29
TraesCS7B01G024700.1	Wheat	cytosol	29.0	31.29
HORVU7Hr1G000890.2	Barley	cytosol	24.1	31.22
HORVU7Hr1G026360.1	Barley	extracellular	28.49	30.59
TraesCS3B01G497800.1	Wheat	cytosol	25.39	30.51
PGSC0003DMT400021631	Potato	cytosol	26.59	30.35
TraesCS7B01G024900.1	Wheat	cytosol	28.4	30.3
PGSC0003DMT400028871	Potato	cytosol	11.7	29.89
PGSC0003DMT400028882	Potato	cytosol	7.23	29.79
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	30.38	29.74
HORVU7Hr1G002260.2	Barley	cytosol	26.51	29.64
HORVU7Hr1G000760.3	Barley	cytosol	24.44	29.58
Os08t0543050-00	Rice	cytosol, plastid	30.72	29.5
TraesCS7D01G017700.1	Wheat	cytosol	29.0	29.28
OQU80781	Sorghum	cytosol, extracellular, nucleus	29.86	29.18
Os08t0543100-00	Rice	cytosol	29.6	29.05
TraesCS7D01G000900.1	Wheat	plasma membrane	27.62	29.05
OQU80806	Sorghum	cytosol	28.83	28.98
TraesCS7D01G123000.1	Wheat	cytosol, plastid	28.74	28.89
Os08t0543500-01	Rice	cytosol, plastid	28.49	28.71
TraesCS7D01G017300.1	Wheat	plasma membrane	18.16	28.71
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	23.92	28.57
EES14143	Sorghum	cytosol	28.66	28.49
EES14172	Sorghum	cytosol	29.17	28.46
TraesCS5D01G031100.1	Wheat	mitochondrion	18.85	28.22
PGSC0003DMT400022156	Potato	cytosol	30.72	28.2
PGSC0003DMT400022154	Potato	cytosol	30.03	28.19
Os05t0380300-01	Rice	plasma membrane	30.46	28.12
TraesCS7D01G018000.1	Wheat	cytosol	27.88	28.1
PGSC0003DMT400011301	Potato	cytosol	30.46	27.94
Zm00001d031711_P001	Maize	cytosol	28.66	27.87
PGSC0003DMT400028851	Potato	cytosol	9.9	27.84
PGSC0003DMT400071966	Potato	nucleus	29.69	27.8
TraesCS5D01G398100.1	Wheat	cytosol	28.74	27.69
PGSC0003DMT400056053	Potato	cytosol	26.42	27.61
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	29.69	27.51
PGSC0003DMT400049984	Potato	cytosol	28.83	27.48
PGSC0003DMT400021634	Potato	cytosol	29.86	27.26
PGSC0003DMT400028691	Potato	cytosol	30.21	27.21
HORVU5Hr1G006710.5	Barley	cytosol	29.6	27.15
TraesCS7B01G339900.1	Wheat	plasma membrane	28.66	26.96
PGSC0003DMT400065971	Potato	cytosol	22.2	26.82
PGSC0003DMT400028843	Potato	cytosol	17.3	25.38
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	16.27	23.25

Protein Annotations

EntrezGene:102578748	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1A8Z3
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400006785	PGSC:PGSC0003DMG400006785
EnsemblPlants:PGSC0003DMT400017461	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF875	InterPro:RX-like_CC	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002958B7C	RefSeq:XP_006345413.1	RefSeq:XP_006345414.1	SEG:seg

Description

CC-NBS-LRR resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006785]

Coordinates

chr1:+:65253347..65260522

Molecular Weight (calculated)

132618.0 Da

IEP (calculated)

7.292

GRAVY (calculated)

-0.059

Length

1162 amino acids

Sequence
(BLAST)

0001: MTEILYTLAA EILMKLGSLA AHELGSLWGL KDDLSKLRDT VSAMEAVFLD VEEKQGDSRE VKNWVRKLRA VFFEADDLLD DFYTEITRRN LLMQKNPSKK
0101: ISIFFSKSNP VLYSLEIHQR LKVIRRKLEA IEKDKHMLHL VEKQVVDFEL PDRETHSFVN VDEVIGREDE KRVTVDRLLD VRENVCVVPI IGIGGLGKTT
0201: LAQLVYNEDR VKKHFDLRIW VFVSHIFNVK LIVEKMIESI TGMKPQSLHF DRLQDQLRKE IDGKKYLLVL DDMWNENREI WLKLQDLLIG GARGSKVLVT
0301: TRSGLVAAAM GTAPPCNLKG LPEDMSWSLF SKLAFKPGEE INSSLVAIGK EILRKCAGVP LAIRILGSFL YYKETEAEWL YVKNHQLTDM AESADIEILP
0401: ILKLSYDNLP IHLKHCFSYC SIFQKNQTIS KKTLIQLWIA QGFIRSNDEE NECQEDVGER YFMGLLRRSF FQDVKEHRLG DIISCKMHDL IHDLAKMVAE
0501: NETLMLTSAG NKSSVNICHL SVGPVHDSAW ELPHSLLKEK NLRTFLMPIA SRDYLKSGRF IGSEKQSKSV VDAVISNFRS LRVLDLHGLG INEVPGSVSM
0601: LKHLRYIDLS ENNFVTLPKS MSKLLNLQTL KLSYCFDLCE LPENIHKMVN IRHLELDGCL NLSKMPCGIG QLTALRTLSQ FVIGQETSTS SKVNAVLTDL
0701: NGLVKLRGKL TLRNLGCIEC LCPKINDAVL KNKEYLQSLR LEWTYEAVND EYDELLLEGL QPHENLKVLF IERYGGQSFP KWMMVGLHSS LPKLTKLTLK
0801: NLKVCKSLPP FGCLPSLQSL KLENLTLLEY IEHTSYDGSQ FGMELQKGSA MYFPSLKELK LCNLPCLKGW WKKEVMAGSE SSSFPNRLLL SSFPSLSKLT
0901: IQDCLMLEFM PINPRLEELN LIRVGNKLLQ QLMMLLETTL SANCSSFLAV SKLKSLYILD VRELFLLPEG LQNLSRLDHL EINGCPNLLS LPIEGMRALN
1001: MLRFLHVHDC GLTSLFQAIK HLYALETLVI SSCKEMNLST DNDQEYLQFE GLKSLHTVYI QEIPKLVHLP VWLQYLPSLR ALHIEKCYSL LDLPDWISDL
1101: KSLHALFIYK CPKLTSIPAG MVHLTSLEEL RILMCPNLWT CCQNEQGEDW PKIAHIPKVI VK

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.