Factsheet for PGSC0003DMT400022135

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g064610.2.1	Tomato	nucleus	57.09	91.16
PGSC0003DMT400024123	Potato	plasma membrane	73.88	77.02
PGSC0003DMT400050981	Potato	cytosol	27.28	76.57
PGSC0003DMT400051008	Potato	cytosol	23.2	74.69
PGSC0003DMT400024060	Potato	cytosol	30.0	74.46
PGSC0003DMT400024057	Potato	vacuole	49.32	73.2
PGSC0003DMT400079272	Potato	cytosol, plasma membrane	68.83	71.26
PGSC0003DMT400076092	Potato	cytosol	53.59	71.13
PGSC0003DMT400051007	Potato	cytosol	31.26	70.46
PGSC0003DMT400043956	Potato	cytosol	67.67	70.4
PGSC0003DMT400046505	Potato	plasma membrane	47.67	70.04
PGSC0003DMT400079342	Potato	cytosol	48.74	69.43
PGSC0003DMT400079343	Potato	cytosol	42.62	69.03
PGSC0003DMT400043963	Potato	endoplasmic reticulum, plasma membrane	64.76	68.27
PGSC0003DMT400019688	Potato	cytosol, plasma membrane, plastid	41.55	67.61
PGSC0003DMT400014280	Potato	extracellular, plasma membrane	27.09	67.23
PGSC0003DMT400008852	Potato	mitochondrion	24.27	67.02
PGSC0003DMT400051247	Potato	extracellular, plasma membrane	36.5	65.96
PGSC0003DMT400054250	Potato	cytosol	35.63	64.96
PGSC0003DMT400006336	Potato	cytosol	34.17	64.12
PGSC0003DMT400043990	Potato	cytosol	23.01	62.86
PGSC0003DMT400024063	Potato	cytosol	32.62	62.8
KRH74677	Soybean	cytosol	22.14	51.7
PGSC0003DMT400012963	Potato	cytosol	53.3	48.2
KRH75154	Soybean	cytosol	38.16	44.36
PGSC0003DMT400079273	Potato	extracellular, plasma membrane	34.95	44.28
KRH69426	Soybean	cytosol	37.18	43.33
KRH70781	Soybean	cytosol	24.37	42.4
KRH11738	Soybean	cytosol	37.38	41.58
KRH69482	Soybean	cytosol	34.37	41.21
KRH12679	Soybean	nucleus	40.0	40.79
KRH36732	Soybean	cytosol	39.81	40.76
KRH74673	Soybean	cytosol	34.17	40.46
KRH11739	Soybean	cytosol	39.42	40.24
KRH36734	Soybean	plasma membrane	39.32	40.22
KRH25740	Soybean	cytosol	36.41	40.19
KRH76379	Soybean	cytosol	20.78	38.49
PGSC0003DMT400028879	Potato	extracellular	12.23	37.28
KRH69474	Soybean	cytosol	26.31	35.7
PGSC0003DMT400028417	Potato	cytosol, golgi, plastid	12.43	34.88
PGSC0003DMT400011307	Potato	cytosol	13.59	34.57
HORVU7Hr1G002290.1	Barley	cytosol	21.84	34.46
TraesCS5B01G034600.1	Wheat	cytosol	15.15	34.44
Os08t0542200-01	Rice	cytosol	16.21	34.36
PGSC0003DMT400017408	Potato	cytosol	36.99	34.29
TraesCS7D01G017600.1	Wheat	cytosol	24.95	33.29
TraesCS7D01G018400.1	Wheat	cytosol	10.29	33.02
TraesCS5B01G309200.1	Wheat	cytosol	13.88	32.5
PGSC0003DMT400021607	Potato	cytosol	14.95	32.49
TraesCS5B01G034500.1	Wheat	cytosol	14.47	32.46
PGSC0003DMT400008029	Potato	cytosol	36.6	32.0
TraesCS7D01G001400.1	Wheat	cytosol, endoplasmic reticulum, golgi	13.3	31.64
TraesCS7D01G122800.1	Wheat	cytosol	22.04	31.57
HORVU7Hr1G000950.1	Barley	cytosol	16.6	31.49
PGSC0003DMT400017461	Potato	cytosol	35.44	31.41
TraesCS7D01G018200.1	Wheat	cytosol	25.92	31.26
TraesCS7D01G018500.1	Wheat	cytosol	16.99	31.25
TraesCS7B01G056900.1	Wheat	extracellular, plasma membrane	22.43	31.13
TraesCS7D01G018700.1	Wheat	cytosol	21.16	30.7
HORVU7Hr1G000890.2	Barley	cytosol	26.7	30.66
TraesCS7B01G024800.1	Wheat	cytosol, plastid	11.94	30.6
PGSC0003DMT400021294	Potato	cytosol	17.77	30.35
PGSC0003DMT400044170	Potato	cytosol	32.23	30.35
TraesCS3B01G503600.1	Wheat	extracellular, nucleus, plastid, vacuole	26.6	30.14
PGSC0003DMT400049255	Potato	cytosol	26.89	30.04
PGSC0003DMT400028871	Potato	cytosol	13.2	29.89
TraesCS7D01G017900.1	Wheat	cytosol	10.78	29.76
TraesCS7D01G017400.1	Wheat	cytosol, extracellular	17.28	29.42
TraesCS7B01G024600.1	Wheat	cytosol	17.48	29.17
TraesCS7D01G122700.1	Wheat	cytosol	29.32	29.01
Os05t0380300-01	Rice	plasma membrane	35.15	28.75
TraesCS3B01G497800.1	Wheat	cytosol	26.99	28.75
PGSC0003DMT400028882	Potato	cytosol	7.86	28.72
TraesCS7D01G122900.1	Wheat	cytosol	29.51	28.65
PGSC0003DMT400021631	Potato	cytosol	28.16	28.49
HORVU7Hr1G000760.3	Barley	cytosol	26.5	28.44
HORVU7Hr1G026360.1	Barley	extracellular	29.81	28.37
PGSC0003DMT400028851	Potato	cytosol	11.36	28.33
PGSC0003DMT400033635	Potato	extracellular, plasma membrane, plastid	34.17	28.07
TraesCS7D01G123300.1	Wheat	cytosol, mitochondrion, nucleus	20.19	28.07
HORVU7Hr1G002260.2	Barley	cytosol	28.16	27.91
TraesCS7D01G123100.1	Wheat	endoplasmic reticulum, golgi, vacuole	12.14	27.9
TraesCS7B01G024700.1	Wheat	cytosol	29.13	27.86
TraesCS7B01G024900.1	Wheat	cytosol	29.32	27.73
PGSC0003DMT400049984	Potato	cytosol	32.62	27.56
Os08t0543100-00	Rice	cytosol	31.65	27.53
TraesCS7D01G000900.1	Wheat	plasma membrane	29.42	27.42
Os08t0543500-01	Rice	cytosol, plastid	30.29	27.06
OQU80806	Sorghum	cytosol	30.29	26.99
PGSC0003DMT400022156	Potato	cytosol	33.11	26.94
TraesCS7D01G017700.1	Wheat	cytosol	30.1	26.93
TraesCS7B01G096400.1	Wheat	cytosol, extracellular, nucleus	25.44	26.93
PGSC0003DMT400022154	Potato	cytosol	32.33	26.9
TraesCS5D01G315800.1	Wheat	extracellular, golgi, nucleus, plastid	30.97	26.87
EES14172	Sorghum	cytosol	31.07	26.87
TraesCS5D01G398100.1	Wheat	cytosol	31.46	26.87
EES14143	Sorghum	cytosol	30.29	26.69
PGSC0003DMT400071966	Potato	nucleus	32.14	26.67
TraesCS7D01G018000.1	Wheat	cytosol	29.81	26.63
PGSC0003DMT400056053	Potato	cytosol	28.74	26.62
Os08t0543050-00	Rice	cytosol, plastid	31.26	26.61
TraesCS7D01G123000.1	Wheat	cytosol, plastid	29.81	26.56
PGSC0003DMT400011301	Potato	cytosol	32.62	26.52
PGSC0003DMT400028691	Potato	cytosol	33.11	26.43
TraesCS7D01G017300.1	Wheat	plasma membrane	18.64	26.12
Zm00001d031711_P001	Maize	cytosol	30.29	26.11
OQU80781	Sorghum	cytosol, extracellular, nucleus	29.9	25.9
TraesCS5D01G031100.1	Wheat	mitochondrion	19.42	25.77
PGSC0003DMT400021634	Potato	cytosol	31.75	25.69
TraesCS7B01G339900.1	Wheat	plasma membrane	30.39	25.34
PGSC0003DMT400065971	Potato	cytosol	22.91	24.53
HORVU5Hr1G006710.5	Barley	cytosol	29.9	24.31
PGSC0003DMT400028843	Potato	cytosol	18.35	23.86

Protein Annotations

EntrezGene:102584764	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1AG91
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400008588	PGSC:PGSC0003DMG400008588
EnsemblPlants:PGSC0003DMT400022135	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF863	InterPro:RX-like_CC	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002952166	RefSeq:XP_006355884.1	SEG:seg

Description

Disease resistance protein RGA4 [Source:PGSC_GENE;Acc:PGSC0003DMG400008588]

Coordinates

chr9:-:46312335..46316463

Molecular Weight (calculated)

116877.0 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.153

Length

1030 amino acids

Sequence
(BLAST)

0001: MADAFLQLLL DNLTSFIHGK LVLFFGFEKE FEKLSSMFST IQAVLEDAQE KQLKDKTIEN WLQKLNGAAY EVDDILDECK SEATRFEQSR LGFYHPGIIT
0101: FRHKIGKRMK EIMEKVDAIA EERRKFHFLE KITERQASTR ETGFVLTEPE VYGRDKEQDE IVKILINNVN VAKELPVFPI IGMGGLGKTT LAQMIFNDER
0201: VTEHFNPKIW VCVSDDFDEK RLIKTIVGNI ERRSLDVEDL ASFQKKLQEL LTGKRYLLVL DDVWNDDQEK WAKLRAVLKV GARGASVLAT TRLEKVGSIM
0301: GTLEPYRLSS LSQHDGLLLF MQRAFGQQRE INSNLVAVGK EIVKKCGGVP LAAKTLGGIL RFKREESEWE HVRDNEIWNL PQDESSILPA LRLSYHHLPL
0401: NLRQCFAYCA VFPKDTKMEK DNLITLWMAH GFLSSKGNME LEDVGNEVWK ELYMRSFFQE VVVDEFGKTY FKMHDLIHDL ATSLISANTS SSNIRQVRVG
0501: EENNILSIGF SKTVPSYSPS LLKMFVSLRV LDMSYSRVYQ LSSSIGNLIH LRLLNLSSTR IRSLPKRLCK LQNLQTLNLK SCRSLSCLPK QTSKLSSLRN
0601: LLLDYCPLTS MSPRIGSLTC LKTLDCFVIG KRKGYRLGEL RNLNLGGSLS ITHLERVKKD IAAKEANLSA KANLYSLCMS WDRSDRYESE NDLDEKVLKS
0701: LKPHPNLKSL KVTGFRGLRL PDWMNGSVLK NVVSIDIDSC KNCLCLPPFG ELPCLESLCL FGGSVDYIED NVHGCGRFPS LRRLVIKGFP NLKGLLQKEG
0801: KDQFPILEEM EIHDCPMLVF PTLACVKKLE VWGNTDATSL SSISDLSILT SLCISHNIEQ TSLPEEMFKR LAYLESMSIS SFKKLKELPT SLASLTALKR
0901: LDIRSCHSLE SLPEQVLEGL TSLTELFIQD CEMLKTLSEG LQHLTTLTRL VVALCPEMVT LPFGIQNLHS LQSLVIWSCP RLQSLPAGIM ETKNLQALRI
1001: VYCPELAKRC EKEIGEDWNK IAHIPNVYIS

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.